Strain Fitness in Dechlorosoma suillum PS around Dsui_1810
Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,908,608 | + | -2.2 | |||
1,908,645 | - | -0.2 | |||
1,908,647 | + | Dsui_1810 | 0.20 | -5.3 | |
1,908,657 | + | Dsui_1810 | 0.23 | -3.3 | |
1,908,657 | + | Dsui_1810 | 0.23 | -6.9 | |
1,908,683 | - | Dsui_1810 | 0.31 | -0.8 | |
1,908,841 | - | Dsui_1810 | 0.80 | +0.8 | |
1,908,868 | + | Dsui_1810 | 0.88 | -4.5 | |
1,908,868 | + | Dsui_1810 | 0.88 | -4.2 | |
1,908,876 | - | -0.2 | |||
1,908,904 | - | -0.8 | |||
1,908,934 | + | -4.8 | |||
1,908,942 | - | -0.8 | |||
1,908,982 | + | Dsui_1811 | 0.13 | -6.8 | |
1,909,089 | - | Dsui_1811 | 0.31 | -0.8 | |
1,909,097 | - | Dsui_1811 | 0.32 | -0.2 | |
1,909,097 | - | Dsui_1811 | 0.32 | -1.2 | |
1,909,192 | + | Dsui_1811 | 0.48 | -6.1 | |
1,909,195 | - | Dsui_1811 | 0.48 | +0.8 | |
1,909,223 | + | Dsui_1811 | 0.53 | -7.1 | |
1,909,474 | + | -7.1 | |||
1,909,476 | - | -3.0 | |||
1,909,539 | + | +0.7 | |||
1,909,541 | - | -1.3 | |||
1,909,611 | + | -0.3 | |||
1,909,662 | + | -0.9 |
Or see this region's nucleotide sequence