Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1724 and Dsui_1725 overlap by 20 nucleotides Dsui_1725 and Dsui_1726 are separated by 12 nucleotides Dsui_1726 and Dsui_1727 overlap by 8 nucleotides Dsui_1727 and Dsui_1728 are separated by 4 nucleotides
Dsui_1724: Dsui_1724 - flagellar biosynthetic protein FlhF, at 1,815,505 to 1,816,872
_1724
Dsui_1725: Dsui_1725 - ATPase involved in chromosome partitioning, at 1,816,853 to 1,817,755
_1725
Dsui_1726: Dsui_1726 - RNA polymerase sigma factor, FliA/WhiG family, at 1,817,768 to 1,818,508
_1726
Dsui_1727: Dsui_1727 - flagellar motor component, at 1,818,501 to 1,819,241
_1727
Dsui_1728: Dsui_1728 - flagellar motor protein, at 1,819,246 to 1,820,097
_1728
Position (kb)
1817
1818
1819 Strain fitness (log2 ratio)
-2
-1
0
1 at 1816.927 kb on - strand at 1817.019 kb on - strand, within Dsui_1725 at 1817.019 kb on - strand at 1817.230 kb on - strand, within Dsui_1725 at 1817.236 kb on - strand, within Dsui_1725 at 1817.376 kb on + strand, within Dsui_1725 at 1817.443 kb on + strand, within Dsui_1725 at 1817.451 kb on - strand, within Dsui_1725 at 1817.517 kb on + strand, within Dsui_1725 at 1817.540 kb on + strand, within Dsui_1725 at 1817.548 kb on - strand, within Dsui_1725 at 1817.655 kb on + strand, within Dsui_1725 at 1817.655 kb on + strand, within Dsui_1725 at 1817.749 kb on - strand at 1817.750 kb on + strand at 1817.891 kb on + strand, within Dsui_1726 at 1817.914 kb on + strand, within Dsui_1726 at 1817.918 kb on - strand, within Dsui_1726 at 1817.956 kb on + strand, within Dsui_1726 at 1818.032 kb on + strand, within Dsui_1726 at 1818.059 kb on + strand, within Dsui_1726 at 1818.125 kb on + strand, within Dsui_1726 at 1818.133 kb on - strand, within Dsui_1726 at 1818.133 kb on - strand, within Dsui_1726 at 1818.178 kb on - strand, within Dsui_1726 at 1818.233 kb on - strand, within Dsui_1726 at 1818.312 kb on + strand, within Dsui_1726 at 1818.357 kb on + strand, within Dsui_1726 at 1818.365 kb on - strand, within Dsui_1726 at 1818.447 kb on - strand at 1818.448 kb on - strand at 1818.609 kb on - strand, within Dsui_1727 at 1818.628 kb on - strand, within Dsui_1727 at 1818.660 kb on - strand at 1818.703 kb on - strand, within Dsui_1727 at 1818.722 kb on + strand, within Dsui_1727 at 1818.831 kb on + strand, within Dsui_1727 at 1818.879 kb on + strand, within Dsui_1727 at 1818.880 kb on + strand, within Dsui_1727 at 1818.991 kb on - strand, within Dsui_1727 at 1818.998 kb on - strand, within Dsui_1727 at 1819.220 kb on + strand at 1819.378 kb on + strand, within Dsui_1728 at 1819.383 kb on + strand, within Dsui_1728 at 1819.502 kb on - strand, within Dsui_1728
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 1,816,927 - -0.2 1,817,019 - Dsui_1725 0.18 +0.8 1,817,019 - +0.8 1,817,230 - Dsui_1725 0.42 -0.2 1,817,236 - Dsui_1725 0.42 -1.2 1,817,376 + Dsui_1725 0.58 -0.0 1,817,443 + Dsui_1725 0.65 -0.2 1,817,451 - Dsui_1725 0.66 -0.2 1,817,517 + Dsui_1725 0.74 -0.4 1,817,540 + Dsui_1725 0.76 -0.1 1,817,548 - Dsui_1725 0.77 -0.2 1,817,655 + Dsui_1725 0.89 +0.1 1,817,655 + Dsui_1725 0.89 -0.0 1,817,749 - -0.2 1,817,750 + -0.4 1,817,891 + Dsui_1726 0.17 +0.1 1,817,914 + Dsui_1726 0.20 +0.0 1,817,918 - Dsui_1726 0.20 +0.8 1,817,956 + Dsui_1726 0.25 -0.3 1,818,032 + Dsui_1726 0.36 -0.0 1,818,059 + Dsui_1726 0.39 +0.3 1,818,125 + Dsui_1726 0.48 -0.1 1,818,133 - Dsui_1726 0.49 -0.2 1,818,133 - Dsui_1726 0.49 -0.2 1,818,178 - Dsui_1726 0.55 -0.2 1,818,233 - Dsui_1726 0.63 +0.8 1,818,312 + Dsui_1726 0.73 +0.8 1,818,357 + Dsui_1726 0.79 +0.1 1,818,365 - Dsui_1726 0.81 +0.8 1,818,447 - -0.2 1,818,448 - -0.2 1,818,609 - Dsui_1727 0.15 -1.8 1,818,628 - Dsui_1727 0.17 -0.2 1,818,660 - +0.8 1,818,703 - Dsui_1727 0.27 -0.2 1,818,722 + Dsui_1727 0.30 +0.0 1,818,831 + Dsui_1727 0.45 +0.8 1,818,879 + Dsui_1727 0.51 -0.2 1,818,880 + Dsui_1727 0.51 +0.7 1,818,991 - Dsui_1727 0.66 -0.2 1,818,998 - Dsui_1727 0.67 -1.2 1,819,220 + -0.0 1,819,378 + Dsui_1728 0.15 -0.1 1,819,383 + Dsui_1728 0.16 -0.2 1,819,502 - Dsui_1728 0.30 +0.8
Or see this region's nucleotide sequence