Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1694 and Dsui_1695 are separated by 30 nucleotides Dsui_1695 and Dsui_1696 are separated by 36 nucleotides
Dsui_1694: Dsui_1694 - AAA ATPase, at 1,782,381 to 1,783,679
_1694
Dsui_1695: Dsui_1695 - hypothetical protein, at 1,783,710 to 1,784,069
_1695
Dsui_1696: Dsui_1696 - seryl-tRNA synthetase, at 1,784,106 to 1,785,389
_1696
Position (kb)
1782
1783
1784 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1781.447 kb on - strand at 1781.449 kb on + strand at 1781.449 kb on - strand at 1781.481 kb on + strand at 1781.487 kb on - strand at 1781.524 kb on + strand at 1781.533 kb on - strand at 1781.533 kb on - strand at 1781.535 kb on + strand at 1781.535 kb on + strand at 1781.543 kb on - strand at 1781.569 kb on + strand at 1781.594 kb on - strand at 1781.602 kb on - strand at 1781.670 kb on - strand at 1781.693 kb on + strand at 1781.693 kb on + strand at 1781.699 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on - strand at 1781.709 kb on - strand at 1781.709 kb on - strand at 1781.739 kb on + strand at 1781.739 kb on + strand at 1781.749 kb on + strand at 1781.774 kb on + strand at 1781.774 kb on + strand at 1781.780 kb on + strand at 1781.788 kb on - strand at 1781.796 kb on - strand at 1781.796 kb on - strand at 1781.836 kb on + strand at 1781.836 kb on + strand at 1781.842 kb on + strand at 1781.844 kb on - strand at 1781.877 kb on + strand at 1781.885 kb on + strand at 1781.901 kb on + strand at 1781.901 kb on + strand at 1781.902 kb on - strand at 1781.909 kb on - strand at 1781.935 kb on + strand at 1781.985 kb on + strand at 1781.999 kb on + strand at 1782.007 kb on - strand at 1782.012 kb on - strand at 1782.012 kb on - strand at 1782.014 kb on + strand at 1782.014 kb on + strand at 1782.014 kb on + strand at 1782.022 kb on - strand at 1782.022 kb on - strand at 1782.022 kb on - strand at 1782.022 kb on - strand at 1782.029 kb on + strand at 1782.030 kb on + strand at 1782.031 kb on + strand at 1782.041 kb on + strand at 1782.053 kb on + strand at 1782.053 kb on + strand at 1782.061 kb on - strand at 1782.069 kb on - strand at 1782.089 kb on + strand at 1782.094 kb on - strand at 1782.117 kb on + strand at 1782.117 kb on + strand at 1782.133 kb on + strand at 1782.143 kb on + strand at 1782.143 kb on + strand at 1782.143 kb on + strand at 1782.151 kb on - strand at 1782.276 kb on - strand at 1782.301 kb on - strand at 1782.331 kb on + strand at 1782.565 kb on - strand, within Dsui_1694 at 1782.638 kb on + strand, within Dsui_1694 at 1782.680 kb on + strand, within Dsui_1694 at 1782.707 kb on + strand, within Dsui_1694 at 1782.727 kb on + strand, within Dsui_1694 at 1782.728 kb on - strand, within Dsui_1694 at 1782.852 kb on - strand, within Dsui_1694 at 1782.941 kb on - strand, within Dsui_1694 at 1783.009 kb on + strand, within Dsui_1694 at 1783.062 kb on + strand, within Dsui_1694 at 1783.114 kb on - strand, within Dsui_1694 at 1783.284 kb on + strand, within Dsui_1694 at 1783.334 kb on - strand, within Dsui_1694 at 1783.343 kb on + strand, within Dsui_1694 at 1783.423 kb on + strand, within Dsui_1694 at 1783.489 kb on - strand at 1783.501 kb on - strand, within Dsui_1694 at 1783.526 kb on - strand, within Dsui_1694 at 1783.526 kb on - strand, within Dsui_1694 at 1783.697 kb on - strand at 1783.757 kb on - strand at 1783.779 kb on - strand, within Dsui_1695 at 1783.789 kb on - strand, within Dsui_1695 at 1783.789 kb on - strand, within Dsui_1695 at 1783.803 kb on + strand, within Dsui_1695 at 1783.828 kb on + strand, within Dsui_1695 at 1783.857 kb on + strand, within Dsui_1695 at 1783.858 kb on - strand, within Dsui_1695 at 1783.858 kb on - strand, within Dsui_1695 at 1783.858 kb on - strand, within Dsui_1695 at 1783.860 kb on + strand, within Dsui_1695 at 1783.870 kb on - strand at 1783.904 kb on - strand, within Dsui_1695 at 1783.970 kb on + strand, within Dsui_1695 at 1783.984 kb on - strand, within Dsui_1695 at 1783.989 kb on - strand, within Dsui_1695
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 1,781,447 - +0.7 1,781,449 + -2.6 1,781,449 - -1.9 1,781,481 + -2.6 1,781,487 - +0.7 1,781,524 + -1.8 1,781,533 - -1.3 1,781,533 - -0.3 1,781,535 + -0.7 1,781,535 + +0.7 1,781,543 - -0.9 1,781,569 + -3.6 1,781,594 - -0.3 1,781,602 - +0.7 1,781,670 - -1.6 1,781,693 + -1.6 1,781,693 + -2.3 1,781,699 + -2.3 1,781,701 + -1.3 1,781,701 + -1.6 1,781,701 + +0.1 1,781,701 + -2.3 1,781,701 + +1.4 1,781,701 - +0.7 1,781,709 - -0.3 1,781,709 - +0.7 1,781,739 + +0.1 1,781,739 + -1.3 1,781,749 + +0.7 1,781,774 + +0.7 1,781,774 + -1.3 1,781,780 + +0.7 1,781,788 - -0.3 1,781,796 - -1.9 1,781,796 - +0.7 1,781,836 + -0.9 1,781,836 + -0.3 1,781,842 + +0.7 1,781,844 - -1.6 1,781,877 + -1.3 1,781,885 + -3.4 1,781,901 + -1.6 1,781,901 + +0.7 1,781,902 - -0.3 1,781,909 - -0.3 1,781,935 + -0.3 1,781,985 + -0.9 1,781,999 + +0.7 1,782,007 - -0.3 1,782,012 - -0.3 1,782,012 - -1.3 1,782,014 + -0.9 1,782,014 + -0.3 1,782,014 + +0.7 1,782,022 - +0.7 1,782,022 - +0.7 1,782,022 - -0.9 1,782,022 - -1.9 1,782,029 + -0.9 1,782,030 + -1.9 1,782,031 + -3.3 1,782,041 + -0.3 1,782,053 + +0.7 1,782,053 + +0.7 1,782,061 - +0.7 1,782,069 - -0.3 1,782,089 + -3.1 1,782,094 - -1.2 1,782,117 + -0.9 1,782,117 + -1.3 1,782,133 + -2.9 1,782,143 + -0.9 1,782,143 + -0.3 1,782,143 + -0.3 1,782,151 - +0.7 1,782,276 - +0.7 1,782,301 - +0.7 1,782,331 + -1.5 1,782,565 - Dsui_1694 0.14 -1.4 1,782,638 + Dsui_1694 0.20 -0.9 1,782,680 + Dsui_1694 0.23 -1.2 1,782,707 + Dsui_1694 0.25 -2.6 1,782,727 + Dsui_1694 0.27 -1.3 1,782,728 - Dsui_1694 0.27 +0.7 1,782,852 - Dsui_1694 0.36 -0.3 1,782,941 - Dsui_1694 0.43 -0.3 1,783,009 + Dsui_1694 0.48 -0.5 1,783,062 + Dsui_1694 0.52 +0.0 1,783,114 - Dsui_1694 0.56 -2.1 1,783,284 + Dsui_1694 0.70 -1.9 1,783,334 - Dsui_1694 0.73 -0.3 1,783,343 + Dsui_1694 0.74 -0.9 1,783,423 + Dsui_1694 0.80 -0.1 1,783,489 - +0.7 1,783,501 - Dsui_1694 0.86 -0.3 1,783,526 - Dsui_1694 0.88 +0.7 1,783,526 - Dsui_1694 0.88 -1.6 1,783,697 - +0.7 1,783,757 - +0.7 1,783,779 - Dsui_1695 0.19 -1.6 1,783,789 - Dsui_1695 0.22 +0.7 1,783,789 - Dsui_1695 0.22 +0.7 1,783,803 + Dsui_1695 0.26 -0.9 1,783,828 + Dsui_1695 0.33 +0.7 1,783,857 + Dsui_1695 0.41 -0.6 1,783,858 - Dsui_1695 0.41 -1.5 1,783,858 - Dsui_1695 0.41 +0.7 1,783,858 - Dsui_1695 0.41 +0.7 1,783,860 + Dsui_1695 0.42 -0.8 1,783,870 - +0.7 1,783,904 - Dsui_1695 0.54 -2.3 1,783,970 + Dsui_1695 0.72 -1.1 1,783,984 - Dsui_1695 0.76 +0.7 1,783,989 - Dsui_1695 0.78 +0.7
Or see this region's nucleotide sequence