Strain Fitness in Dechlorosoma suillum PS around Dsui_1570
Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,642,138 | + | Dsui_1569 | 0.41 | -1.9 | |
1,642,246 | + | Dsui_1569 | 0.48 | -2.1 | |
1,642,289 | + | Dsui_1569 | 0.51 | +1.0 | |
1,642,291 | - | Dsui_1569 | 0.51 | -2.6 | |
1,642,312 | + | Dsui_1569 | 0.52 | -2.1 | |
1,642,312 | + | Dsui_1569 | 0.52 | -0.1 | |
1,642,312 | + | Dsui_1569 | 0.52 | -1.0 | |
1,642,381 | + | Dsui_1569 | 0.57 | -2.7 | |
1,642,383 | + | Dsui_1569 | 0.57 | -1.1 | |
1,642,484 | - | Dsui_1569 | 0.64 | -0.3 | |
1,642,719 | + | Dsui_1569 | 0.79 | +0.3 | |
1,642,781 | - | Dsui_1569 | 0.83 | -0.3 | |
1,643,034 | + | -1.3 | |||
1,644,412 | + | -0.6 | |||
1,644,477 | + | -1.7 | |||
1,644,490 | - | -2.3 | |||
1,644,775 | + | Dsui_1571 | 0.89 | -0.7 | |
1,644,775 | + | Dsui_1571 | 0.89 | -0.7 | |
1,644,783 | - | +0.7 | |||
1,644,783 | - | +0.7 | |||
1,644,789 | - | +1.7 | |||
1,644,794 | + | -0.2 | |||
1,644,921 | + | -1.7 | |||
1,645,013 | - | Dsui_1572 | 0.30 | -1.6 | |
1,645,071 | + | Dsui_1572 | 0.45 | -0.6 | |
1,645,071 | + | Dsui_1572 | 0.45 | -2.5 | |
1,645,129 | - | Dsui_1572 | 0.59 | +0.7 | |
1,645,186 | + | Dsui_1572 | 0.73 | -1.9 | |
1,645,194 | - | +0.7 | |||
1,645,216 | - | Dsui_1572 | 0.80 | -0.3 | |
1,645,408 | + | -2.1 |
Or see this region's nucleotide sequence