Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1532 and Dsui_1533 are separated by 76 nucleotides Dsui_1533 and Dsui_1534 are separated by 376 nucleotides Dsui_1534 and Dsui_1535 are separated by 30 nucleotides Dsui_1535 and Dsui_1536 are separated by 116 nucleotides
Dsui_1532: Dsui_1532 - fatty-acid desaturase, at 1,594,684 to 1,595,898
_1532
Dsui_1533: Dsui_1533 - disulfide bond formation protein DsbB, at 1,595,975 to 1,596,466
_1533
Dsui_1534: Dsui_1534 - ribosomal protein L33, at 1,596,843 to 1,596,998
_1534
Dsui_1535: Dsui_1535 - ribosomal protein L28, at 1,597,029 to 1,597,262
_1535
Dsui_1536: Dsui_1536 - PilZ domain-containing protein, at 1,597,379 to 1,597,705
_1536
Position (kb)
1595
1596
1597 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1594.983 kb on + strand, within Dsui_1532 at 1594.983 kb on + strand, within Dsui_1532 at 1595.033 kb on - strand, within Dsui_1532 at 1595.191 kb on + strand, within Dsui_1532 at 1595.250 kb on + strand, within Dsui_1532 at 1595.250 kb on + strand, within Dsui_1532 at 1595.258 kb on - strand, within Dsui_1532 at 1595.294 kb on + strand, within Dsui_1532 at 1595.332 kb on - strand, within Dsui_1532 at 1595.392 kb on - strand, within Dsui_1532 at 1595.429 kb on + strand, within Dsui_1532 at 1595.442 kb on - strand, within Dsui_1532 at 1595.501 kb on + strand, within Dsui_1532 at 1595.579 kb on + strand, within Dsui_1532 at 1595.592 kb on + strand, within Dsui_1532 at 1595.757 kb on + strand, within Dsui_1532 at 1595.775 kb on - strand, within Dsui_1532 at 1595.796 kb on - strand at 1595.921 kb on - strand at 1595.953 kb on + strand at 1596.046 kb on - strand, within Dsui_1533 at 1596.056 kb on - strand at 1596.153 kb on - strand at 1596.183 kb on - strand, within Dsui_1533 at 1596.224 kb on + strand, within Dsui_1533 at 1596.237 kb on - strand, within Dsui_1533 at 1596.263 kb on + strand, within Dsui_1533 at 1596.263 kb on + strand, within Dsui_1533 at 1596.271 kb on - strand at 1596.370 kb on + strand, within Dsui_1533 at 1596.373 kb on - strand, within Dsui_1533 at 1596.379 kb on - strand at 1596.525 kb on + strand at 1596.530 kb on + strand at 1596.838 kb on - strand at 1596.936 kb on - strand, within Dsui_1534 at 1597.013 kb on - strand at 1597.384 kb on - strand at 1597.384 kb on - strand at 1597.436 kb on - strand, within Dsui_1536 at 1597.443 kb on - strand, within Dsui_1536 at 1597.447 kb on - strand, within Dsui_1536
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 1,594,983 + Dsui_1532 0.25 -0.3 1,594,983 + Dsui_1532 0.25 -0.3 1,595,033 - Dsui_1532 0.29 +0.7 1,595,191 + Dsui_1532 0.42 -0.6 1,595,250 + Dsui_1532 0.47 -0.0 1,595,250 + Dsui_1532 0.47 -1.2 1,595,258 - Dsui_1532 0.47 -1.3 1,595,294 + Dsui_1532 0.50 -0.5 1,595,332 - Dsui_1532 0.53 -1.3 1,595,392 - Dsui_1532 0.58 -0.9 1,595,429 + Dsui_1532 0.61 -1.2 1,595,442 - Dsui_1532 0.62 -0.3 1,595,501 + Dsui_1532 0.67 +0.5 1,595,579 + Dsui_1532 0.74 -0.8 1,595,592 + Dsui_1532 0.75 -0.8 1,595,757 + Dsui_1532 0.88 -0.9 1,595,775 - Dsui_1532 0.90 +0.7 1,595,796 - -2.9 1,595,921 - -0.9 1,595,953 + +0.2 1,596,046 - Dsui_1533 0.14 -1.3 1,596,056 - +0.7 1,596,153 - +0.7 1,596,183 - Dsui_1533 0.42 -0.3 1,596,224 + Dsui_1533 0.51 -1.3 1,596,237 - Dsui_1533 0.53 -0.9 1,596,263 + Dsui_1533 0.59 -2.1 1,596,263 + Dsui_1533 0.59 -2.4 1,596,271 - -0.3 1,596,370 + Dsui_1533 0.80 -3.1 1,596,373 - Dsui_1533 0.81 -0.3 1,596,379 - +0.7 1,596,525 + +0.7 1,596,530 + +0.7 1,596,838 - -1.0 1,596,936 - Dsui_1534 0.60 +0.2 1,597,013 - -0.1 1,597,384 - -0.2 1,597,384 - -0.1 1,597,436 - Dsui_1536 0.17 +0.6 1,597,443 - Dsui_1536 0.20 -0.2 1,597,447 - Dsui_1536 0.21 +0.1
Or see this region's nucleotide sequence