Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1445 and Dsui_1446 are separated by 11 nucleotides Dsui_1446 and Dsui_1447 are separated by 212 nucleotides Dsui_1447 and Dsui_1448 are separated by 2 nucleotides
Dsui_1445: Dsui_1445 - succinyl-CoA synthetase, beta subunit, at 1,500,292 to 1,501,452
_1445
Dsui_1446: Dsui_1446 - succinyl-CoA synthetase, alpha subunit, at 1,501,464 to 1,502,360
_1446
Dsui_1447: Dsui_1447 - integral membrane protein, YjbE family, at 1,502,573 to 1,503,274
_1447
Dsui_1448: Dsui_1448 - putative ornithine cyclodeaminase, mu-crystallin, at 1,503,277 to 1,504,248
_1448
Position (kb)
1501
1502
1503 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1500.643 kb on + strand, within Dsui_1445 at 1500.643 kb on + strand, within Dsui_1445 at 1500.643 kb on + strand, within Dsui_1445 at 1500.651 kb on - strand, within Dsui_1445 at 1500.770 kb on + strand, within Dsui_1445 at 1500.923 kb on - strand, within Dsui_1445 at 1501.115 kb on + strand, within Dsui_1445 at 1501.123 kb on - strand, within Dsui_1445 at 1501.229 kb on - strand, within Dsui_1445 at 1501.412 kb on + strand at 1501.448 kb on + strand at 1501.448 kb on + strand at 1501.456 kb on - strand at 1501.493 kb on + strand at 1501.493 kb on + strand at 1501.628 kb on + strand, within Dsui_1446 at 1501.861 kb on + strand, within Dsui_1446 at 1501.869 kb on - strand, within Dsui_1446 at 1502.006 kb on + strand, within Dsui_1446 at 1502.052 kb on - strand, within Dsui_1446 at 1502.261 kb on - strand, within Dsui_1446 at 1502.502 kb on - strand at 1502.523 kb on - strand at 1502.540 kb on + strand at 1502.628 kb on - strand at 1502.686 kb on + strand, within Dsui_1447 at 1502.744 kb on - strand, within Dsui_1447 at 1502.761 kb on - strand, within Dsui_1447 at 1502.793 kb on + strand, within Dsui_1447 at 1502.898 kb on - strand, within Dsui_1447 at 1502.898 kb on - strand, within Dsui_1447
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 1,500,643 + Dsui_1445 0.30 -0.1 1,500,643 + Dsui_1445 0.30 -2.7 1,500,643 + Dsui_1445 0.30 -0.6 1,500,651 - Dsui_1445 0.31 +0.6 1,500,770 + Dsui_1445 0.41 -3.1 1,500,923 - Dsui_1445 0.54 -1.0 1,501,115 + Dsui_1445 0.71 -2.3 1,501,123 - Dsui_1445 0.72 +0.6 1,501,229 - Dsui_1445 0.81 -0.4 1,501,412 + -3.1 1,501,448 + -1.5 1,501,448 + -1.1 1,501,456 - -0.4 1,501,493 + -0.4 1,501,493 + -2.0 1,501,628 + Dsui_1446 0.18 -2.4 1,501,861 + Dsui_1446 0.44 -0.8 1,501,869 - Dsui_1446 0.45 -2.0 1,502,006 + Dsui_1446 0.60 -3.0 1,502,052 - Dsui_1446 0.66 +0.6 1,502,261 - Dsui_1446 0.89 +0.6 1,502,502 - +0.6 1,502,523 - +0.6 1,502,540 + -2.2 1,502,628 - -0.4 1,502,686 + Dsui_1447 0.16 -0.6 1,502,744 - Dsui_1447 0.24 +0.6 1,502,761 - Dsui_1447 0.27 -1.7 1,502,793 + Dsui_1447 0.31 -0.2 1,502,898 - Dsui_1447 0.46 -0.4 1,502,898 - Dsui_1447 0.46 -1.4
Or see this region's nucleotide sequence