Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1315 and Dsui_1316 are separated by 30 nucleotides Dsui_1316 and Dsui_1317 overlap by 22 nucleotides Dsui_1317 and Dsui_1318 are separated by 98 nucleotides
Dsui_1315: Dsui_1315 - aspartyl-tRNA synthetase, at 1,373,574 to 1,375,373
_1315
Dsui_1316: Dsui_1316 - hypothetical protein, at 1,375,404 to 1,376,045
_1316
Dsui_1317: Dsui_1317 - putative regulatory protein, FmdB family, at 1,376,024 to 1,376,296
_1317
Dsui_1318: Dsui_1318 - prepilin signal peptidase PulO-like peptidase, at 1,376,395 to 1,377,249
_1318
Position (kb)
1375
1376
1377 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1375.453 kb on - strand at 1375.480 kb on - strand, within Dsui_1316 at 1375.481 kb on - strand, within Dsui_1316 at 1375.678 kb on - strand, within Dsui_1316 at 1375.720 kb on - strand, within Dsui_1316 at 1375.956 kb on - strand, within Dsui_1316 at 1376.156 kb on - strand, within Dsui_1317 at 1376.339 kb on + strand at 1376.339 kb on + strand at 1376.339 kb on + strand at 1376.339 kb on + strand at 1376.339 kb on + strand at 1376.339 kb on + strand at 1376.347 kb on - strand at 1376.347 kb on - strand at 1376.347 kb on - strand at 1376.347 kb on - strand at 1376.347 kb on - strand at 1376.349 kb on + strand at 1376.401 kb on - strand at 1376.421 kb on - strand at 1376.432 kb on + strand at 1376.437 kb on + strand at 1376.537 kb on + strand, within Dsui_1318 at 1376.549 kb on - strand, within Dsui_1318 at 1376.564 kb on + strand, within Dsui_1318 at 1376.571 kb on - strand, within Dsui_1318 at 1376.637 kb on - strand, within Dsui_1318 at 1376.682 kb on + strand, within Dsui_1318 at 1376.720 kb on - strand, within Dsui_1318 at 1376.770 kb on - strand, within Dsui_1318 at 1376.780 kb on - strand, within Dsui_1318 at 1376.840 kb on - strand, within Dsui_1318 at 1376.905 kb on + strand, within Dsui_1318 at 1376.992 kb on + strand, within Dsui_1318
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 1,375,453 - -0.2 1,375,480 - Dsui_1316 0.12 -2.5 1,375,481 - Dsui_1316 0.12 -1.7 1,375,678 - Dsui_1316 0.43 -2.0 1,375,720 - Dsui_1316 0.49 -3.8 1,375,956 - Dsui_1316 0.86 -2.8 1,376,156 - Dsui_1317 0.48 -2.0 1,376,339 + +0.5 1,376,339 + -0.5 1,376,339 + -2.3 1,376,339 + -2.5 1,376,339 + +0.5 1,376,339 + -2.1 1,376,347 - -0.5 1,376,347 - -0.1 1,376,347 - +0.4 1,376,347 - -0.1 1,376,347 - -1.1 1,376,349 + +0.5 1,376,401 - -1.1 1,376,421 - -0.2 1,376,432 + -1.9 1,376,437 + -2.1 1,376,537 + Dsui_1318 0.17 -0.5 1,376,549 - Dsui_1318 0.18 -1.5 1,376,564 + Dsui_1318 0.20 +0.5 1,376,571 - Dsui_1318 0.21 -1.0 1,376,637 - Dsui_1318 0.28 -0.5 1,376,682 + Dsui_1318 0.34 -0.5 1,376,720 - Dsui_1318 0.38 -2.3 1,376,770 - Dsui_1318 0.44 -1.0 1,376,780 - Dsui_1318 0.45 -1.9 1,376,840 - Dsui_1318 0.52 -0.3 1,376,905 + Dsui_1318 0.60 -1.1 1,376,992 + Dsui_1318 0.70 -1.1
Or see this region's nucleotide sequence