Strain Fitness in Dechlorosoma suillum PS around Dsui_1117
Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,164,546 | + | Dsui_1116 | 0.45 | +0.2 | |
1,164,624 | + | Dsui_1116 | 0.50 | +0.0 | |
1,164,632 | - | Dsui_1116 | 0.50 | -0.4 | |
1,164,658 | + | Dsui_1116 | 0.52 | +0.1 | |
1,164,785 | - | Dsui_1116 | 0.60 | -2.2 | |
1,165,137 | + | Dsui_1116 | 0.82 | -0.2 | |
1,165,188 | + | Dsui_1116 | 0.85 | -0.2 | |
1,165,275 | + | +0.4 | |||
1,165,709 | + | Dsui_1117 | 0.48 | -0.8 | |
1,165,736 | + | -0.4 | |||
1,165,817 | - | Dsui_1117 | 0.74 | -0.3 | |
1,165,817 | - | Dsui_1117 | 0.74 | +0.0 | |
1,165,969 | - | -1.4 | |||
1,166,010 | + | +0.6 | |||
1,166,018 | - | +1.2 | |||
1,166,062 | + | -0.7 | |||
1,166,183 | - | Dsui_1118 | 0.15 | +0.6 | |
1,166,193 | - | Dsui_1118 | 0.16 | +0.6 | |
1,166,212 | + | Dsui_1118 | 0.18 | +0.4 | |
1,166,261 | + | Dsui_1118 | 0.24 | +0.7 | |
1,166,278 | + | Dsui_1118 | 0.25 | +0.1 | |
1,166,286 | - | Dsui_1118 | 0.26 | -2.0 | |
1,166,345 | - | Dsui_1118 | 0.33 | -2.0 | |
1,166,524 | + | Dsui_1118 | 0.53 | -0.5 | |
1,166,532 | - | Dsui_1118 | 0.54 | +0.6 | |
1,166,532 | - | Dsui_1118 | 0.54 | -2.0 | |
1,166,532 | - | Dsui_1118 | 0.54 | +0.6 | |
1,166,543 | + | Dsui_1118 | 0.55 | -0.7 | |
1,166,832 | + | Dsui_1118 | 0.87 | -0.3 | |
1,166,832 | + | Dsui_1118 | 0.87 | -0.5 | |
1,166,840 | - | Dsui_1118 | 0.88 | +0.6 |
Or see this region's nucleotide sequence