Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1112 and Dsui_1113 are separated by 77 nucleotides Dsui_1113 and Dsui_1114 are separated by 162 nucleotides
Dsui_1112: Dsui_1112 - ABC-type branched-chain amino acid transport system, periplasmic component, at 1,158,796 to 1,160,124
_1112
Dsui_1113: Dsui_1113 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,160,202 to 1,161,038
_1113
Dsui_1114: Dsui_1114 - coenzyme F390 synthetase, at 1,161,201 to 1,162,433
_1114
Position (kb)
1160
1161
1162 Strain fitness (log2 ratio)
-2
-1
0
1 at 1159.250 kb on + strand, within Dsui_1112 at 1159.298 kb on + strand, within Dsui_1112 at 1159.308 kb on + strand, within Dsui_1112 at 1159.533 kb on - strand, within Dsui_1112 at 1159.624 kb on + strand, within Dsui_1112 at 1159.771 kb on + strand, within Dsui_1112 at 1159.827 kb on + strand, within Dsui_1112 at 1159.878 kb on - strand, within Dsui_1112 at 1160.330 kb on + strand, within Dsui_1113 at 1160.511 kb on + strand, within Dsui_1113 at 1160.516 kb on + strand, within Dsui_1113 at 1160.534 kb on - strand, within Dsui_1113 at 1160.650 kb on + strand, within Dsui_1113 at 1160.709 kb on + strand, within Dsui_1113 at 1160.843 kb on + strand, within Dsui_1113 at 1160.920 kb on + strand, within Dsui_1113 at 1160.926 kb on - strand, within Dsui_1113 at 1160.962 kb on - strand at 1161.007 kb on - strand at 1161.044 kb on - strand at 1161.145 kb on - strand at 1161.146 kb on - strand at 1161.327 kb on - strand, within Dsui_1114 at 1161.461 kb on + strand, within Dsui_1114 at 1161.468 kb on + strand, within Dsui_1114 at 1161.488 kb on + strand, within Dsui_1114 at 1161.517 kb on + strand, within Dsui_1114 at 1161.617 kb on - strand, within Dsui_1114 at 1161.687 kb on - strand, within Dsui_1114 at 1161.732 kb on + strand, within Dsui_1114 at 1161.802 kb on - strand, within Dsui_1114 at 1161.809 kb on - strand, within Dsui_1114 at 1161.809 kb on - strand, within Dsui_1114 at 1161.867 kb on - strand, within Dsui_1114 at 1161.886 kb on + strand, within Dsui_1114 at 1161.931 kb on + strand, within Dsui_1114 at 1161.938 kb on - strand, within Dsui_1114 at 1162.024 kb on - strand, within Dsui_1114
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 1,159,250 + Dsui_1112 0.34 -1.4 1,159,298 + Dsui_1112 0.38 +0.6 1,159,308 + Dsui_1112 0.39 +0.6 1,159,533 - Dsui_1112 0.55 +0.6 1,159,624 + Dsui_1112 0.62 +0.6 1,159,771 + Dsui_1112 0.73 +0.6 1,159,827 + Dsui_1112 0.78 -0.4 1,159,878 - Dsui_1112 0.81 -0.4 1,160,330 + Dsui_1113 0.15 -0.4 1,160,511 + Dsui_1113 0.37 +0.6 1,160,516 + Dsui_1113 0.38 -1.7 1,160,534 - Dsui_1113 0.40 -1.7 1,160,650 + Dsui_1113 0.54 -1.0 1,160,709 + Dsui_1113 0.61 +0.6 1,160,843 + Dsui_1113 0.77 +0.6 1,160,920 + Dsui_1113 0.86 -0.4 1,160,926 - Dsui_1113 0.86 +0.6 1,160,962 - +0.6 1,161,007 - -0.4 1,161,044 - -2.0 1,161,145 - +0.6 1,161,146 - -0.4 1,161,327 - Dsui_1114 0.10 -1.4 1,161,461 + Dsui_1114 0.21 +0.6 1,161,468 + Dsui_1114 0.22 -0.4 1,161,488 + Dsui_1114 0.23 -0.4 1,161,517 + Dsui_1114 0.26 +0.6 1,161,617 - Dsui_1114 0.34 -0.4 1,161,687 - Dsui_1114 0.39 +0.6 1,161,732 + Dsui_1114 0.43 +0.6 1,161,802 - Dsui_1114 0.49 +0.6 1,161,809 - Dsui_1114 0.49 +0.6 1,161,809 - Dsui_1114 0.49 -1.4 1,161,867 - Dsui_1114 0.54 -2.2 1,161,886 + Dsui_1114 0.56 +0.6 1,161,931 + Dsui_1114 0.59 +0.6 1,161,938 - Dsui_1114 0.60 +0.6 1,162,024 - Dsui_1114 0.67 +0.6
Or see this region's nucleotide sequence