Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0807 and Dsui_0808 are separated by 10 nucleotides Dsui_0808 and Dsui_0809 are separated by 116 nucleotides
Dsui_0807: Dsui_0807 - Trk-type K+ transport system, membrane component, at 816,371 to 817,828
_0807
Dsui_0808: Dsui_0808 - K+ transport system, NAD-binding component, at 817,839 to 819,269
_0808
Dsui_0809: Dsui_0809 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 819,386 to 820,642
_0809
Position (kb) 817
818
819
820 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 816.849 kb on + strand, within Dsui_0807 at 816.856 kb on - strand, within Dsui_0807 at 816.857 kb on - strand, within Dsui_0807 at 816.857 kb on - strand, within Dsui_0807 at 816.861 kb on - strand, within Dsui_0807 at 816.864 kb on + strand at 816.876 kb on - strand, within Dsui_0807 at 816.906 kb on + strand, within Dsui_0807 at 816.911 kb on + strand, within Dsui_0807 at 816.914 kb on - strand, within Dsui_0807 at 816.914 kb on - strand, within Dsui_0807 at 816.914 kb on - strand, within Dsui_0807 at 816.919 kb on - strand, within Dsui_0807 at 816.929 kb on - strand, within Dsui_0807 at 816.932 kb on + strand, within Dsui_0807 at 816.963 kb on - strand, within Dsui_0807 at 817.017 kb on - strand, within Dsui_0807 at 817.036 kb on + strand, within Dsui_0807 at 817.038 kb on - strand, within Dsui_0807 at 817.066 kb on - strand, within Dsui_0807 at 817.080 kb on + strand, within Dsui_0807 at 817.080 kb on + strand, within Dsui_0807 at 817.081 kb on - strand, within Dsui_0807 at 817.085 kb on + strand, within Dsui_0807 at 817.085 kb on - strand at 817.098 kb on - strand, within Dsui_0807 at 817.125 kb on + strand, within Dsui_0807 at 817.141 kb on + strand, within Dsui_0807 at 817.171 kb on + strand, within Dsui_0807 at 817.179 kb on - strand, within Dsui_0807 at 817.179 kb on - strand, within Dsui_0807 at 817.179 kb on - strand, within Dsui_0807 at 817.221 kb on + strand, within Dsui_0807 at 817.229 kb on - strand, within Dsui_0807 at 817.234 kb on - strand, within Dsui_0807 at 817.261 kb on - strand, within Dsui_0807 at 817.277 kb on - strand, within Dsui_0807 at 817.279 kb on - strand, within Dsui_0807 at 817.311 kb on - strand, within Dsui_0807 at 817.341 kb on + strand, within Dsui_0807 at 817.349 kb on - strand, within Dsui_0807 at 817.349 kb on - strand, within Dsui_0807 at 817.351 kb on + strand, within Dsui_0807 at 817.413 kb on - strand, within Dsui_0807 at 817.413 kb on - strand, within Dsui_0807 at 817.414 kb on + strand, within Dsui_0807 at 817.423 kb on + strand, within Dsui_0807 at 817.426 kb on + strand, within Dsui_0807 at 817.434 kb on - strand, within Dsui_0807 at 817.465 kb on - strand, within Dsui_0807 at 817.471 kb on + strand, within Dsui_0807 at 817.504 kb on - strand, within Dsui_0807 at 817.512 kb on - strand, within Dsui_0807 at 817.512 kb on - strand, within Dsui_0807 at 817.564 kb on + strand, within Dsui_0807 at 817.578 kb on - strand, within Dsui_0807 at 817.593 kb on + strand, within Dsui_0807 at 817.596 kb on - strand, within Dsui_0807 at 817.598 kb on + strand, within Dsui_0807 at 817.598 kb on + strand, within Dsui_0807 at 817.601 kb on - strand, within Dsui_0807 at 817.606 kb on - strand, within Dsui_0807 at 817.606 kb on - strand, within Dsui_0807 at 817.606 kb on - strand, within Dsui_0807 at 817.612 kb on + strand, within Dsui_0807 at 817.685 kb on - strand at 817.708 kb on - strand at 817.725 kb on - strand at 817.733 kb on + strand at 817.755 kb on - strand at 817.799 kb on + strand at 817.800 kb on - strand at 817.800 kb on - strand at 817.806 kb on - strand at 817.812 kb on + strand at 817.820 kb on - strand at 817.820 kb on - strand at 817.820 kb on - strand at 817.838 kb on - strand at 817.949 kb on + strand at 817.964 kb on - strand at 817.972 kb on + strand at 818.050 kb on + strand, within Dsui_0808 at 818.050 kb on + strand, within Dsui_0808 at 818.050 kb on + strand, within Dsui_0808 at 818.050 kb on + strand, within Dsui_0808 at 818.050 kb on + strand, within Dsui_0808 at 818.050 kb on + strand, within Dsui_0808 at 818.050 kb on + strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.058 kb on - strand, within Dsui_0808 at 818.068 kb on - strand, within Dsui_0808 at 818.075 kb on + strand, within Dsui_0808 at 818.163 kb on - strand, within Dsui_0808 at 818.190 kb on + strand, within Dsui_0808 at 818.198 kb on - strand, within Dsui_0808 at 818.247 kb on + strand, within Dsui_0808 at 818.247 kb on + strand, within Dsui_0808 at 818.252 kb on + strand, within Dsui_0808 at 818.255 kb on - strand, within Dsui_0808 at 818.255 kb on - strand, within Dsui_0808 at 818.271 kb on - strand, within Dsui_0808 at 818.302 kb on + strand, within Dsui_0808 at 818.360 kb on + strand, within Dsui_0808 at 818.391 kb on + strand, within Dsui_0808 at 818.394 kb on - strand, within Dsui_0808 at 818.406 kb on + strand, within Dsui_0808 at 818.411 kb on + strand, within Dsui_0808 at 818.432 kb on + strand, within Dsui_0808 at 818.432 kb on + strand, within Dsui_0808 at 818.435 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.443 kb on - strand, within Dsui_0808 at 818.445 kb on + strand, within Dsui_0808 at 818.458 kb on - strand, within Dsui_0808 at 818.465 kb on + strand, within Dsui_0808 at 818.511 kb on + strand, within Dsui_0808 at 818.637 kb on + strand, within Dsui_0808 at 818.656 kb on + strand, within Dsui_0808 at 818.682 kb on - strand, within Dsui_0808 at 818.840 kb on - strand, within Dsui_0808 at 818.846 kb on - strand, within Dsui_0808 at 818.884 kb on + strand, within Dsui_0808 at 818.887 kb on - strand, within Dsui_0808 at 818.892 kb on - strand, within Dsui_0808 at 818.902 kb on - strand, within Dsui_0808 at 818.935 kb on + strand, within Dsui_0808 at 818.968 kb on + strand, within Dsui_0808 at 819.076 kb on - strand, within Dsui_0808 at 819.076 kb on - strand, within Dsui_0808 at 819.076 kb on - strand, within Dsui_0808 at 819.128 kb on - strand at 819.132 kb on + strand at 819.137 kb on + strand at 819.145 kb on - strand at 819.210 kb on - strand at 819.274 kb on + strand at 819.290 kb on - strand at 819.293 kb on + strand at 819.326 kb on - strand at 819.358 kb on + strand at 819.369 kb on + strand at 819.384 kb on + strand at 819.414 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 816,849 + Dsui_0807 0.33 -2.2 816,856 - Dsui_0807 0.33 -0.6 816,857 - Dsui_0807 0.33 -0.1 816,857 - Dsui_0807 0.33 -0.2 816,861 - Dsui_0807 0.34 -1.8 816,864 + +0.6 816,876 - Dsui_0807 0.35 -0.5 816,906 + Dsui_0807 0.37 +0.6 816,911 + Dsui_0807 0.37 -0.6 816,914 - Dsui_0807 0.37 -0.3 816,914 - Dsui_0807 0.37 -1.2 816,914 - Dsui_0807 0.37 +0.2 816,919 - Dsui_0807 0.38 +2.1 816,929 - Dsui_0807 0.38 +0.2 816,932 + Dsui_0807 0.38 +0.6 816,963 - Dsui_0807 0.41 +0.1 817,017 - Dsui_0807 0.44 +0.2 817,036 + Dsui_0807 0.46 -0.9 817,038 - Dsui_0807 0.46 -0.6 817,066 - Dsui_0807 0.48 -1.7 817,080 + Dsui_0807 0.49 -0.9 817,080 + Dsui_0807 0.49 -1.4 817,081 - Dsui_0807 0.49 -0.8 817,085 + Dsui_0807 0.49 +0.6 817,085 - -0.4 817,098 - Dsui_0807 0.50 -1.0 817,125 + Dsui_0807 0.52 -1.4 817,141 + Dsui_0807 0.53 +1.6 817,171 + Dsui_0807 0.55 -0.2 817,179 - Dsui_0807 0.55 +0.1 817,179 - Dsui_0807 0.55 -1.0 817,179 - Dsui_0807 0.55 -0.2 817,221 + Dsui_0807 0.58 -1.8 817,229 - Dsui_0807 0.59 -2.6 817,234 - Dsui_0807 0.59 -0.4 817,261 - Dsui_0807 0.61 +1.7 817,277 - Dsui_0807 0.62 -1.2 817,279 - Dsui_0807 0.62 -0.4 817,311 - Dsui_0807 0.64 -0.9 817,341 + Dsui_0807 0.67 +0.6 817,349 - Dsui_0807 0.67 -1.9 817,349 - Dsui_0807 0.67 +0.9 817,351 + Dsui_0807 0.67 -1.8 817,413 - Dsui_0807 0.71 -0.1 817,413 - Dsui_0807 0.71 +0.4 817,414 + Dsui_0807 0.72 +0.6 817,423 + Dsui_0807 0.72 -1.0 817,426 + Dsui_0807 0.72 -2.8 817,434 - Dsui_0807 0.73 -1.5 817,465 - Dsui_0807 0.75 -0.7 817,471 + Dsui_0807 0.75 -1.2 817,504 - Dsui_0807 0.78 -1.0 817,512 - Dsui_0807 0.78 +0.0 817,512 - Dsui_0807 0.78 +0.0 817,564 + Dsui_0807 0.82 -2.0 817,578 - Dsui_0807 0.83 -0.4 817,593 + Dsui_0807 0.84 +0.0 817,596 - Dsui_0807 0.84 +0.0 817,598 + Dsui_0807 0.84 -1.0 817,598 + Dsui_0807 0.84 -0.7 817,601 - Dsui_0807 0.84 -0.6 817,606 - Dsui_0807 0.85 -0.1 817,606 - Dsui_0807 0.85 -0.9 817,606 - Dsui_0807 0.85 +0.3 817,612 + Dsui_0807 0.85 -0.4 817,685 - -1.2 817,708 - -0.4 817,725 - -0.9 817,733 + -2.0 817,755 - +0.1 817,799 + -0.4 817,800 - -0.9 817,800 - -0.6 817,806 - +0.7 817,812 + -0.0 817,820 - -0.6 817,820 - +0.4 817,820 - -0.5 817,838 - -0.0 817,949 + -0.9 817,964 - +0.0 817,972 + +0.6 818,050 + Dsui_0808 0.15 -2.0 818,050 + Dsui_0808 0.15 -0.4 818,050 + Dsui_0808 0.15 +2.9 818,050 + Dsui_0808 0.15 +0.6 818,050 + Dsui_0808 0.15 -2.4 818,050 + Dsui_0808 0.15 -0.5 818,050 + Dsui_0808 0.15 -1.2 818,058 - Dsui_0808 0.15 -2.2 818,058 - Dsui_0808 0.15 -0.7 818,058 - Dsui_0808 0.15 -0.5 818,058 - Dsui_0808 0.15 -0.4 818,058 - Dsui_0808 0.15 -0.5 818,058 - Dsui_0808 0.15 -0.4 818,058 - Dsui_0808 0.15 +0.6 818,068 - Dsui_0808 0.16 -0.9 818,075 + Dsui_0808 0.16 -2.4 818,163 - Dsui_0808 0.23 +0.4 818,190 + Dsui_0808 0.25 +0.6 818,198 - Dsui_0808 0.25 -0.1 818,247 + Dsui_0808 0.29 -0.2 818,247 + Dsui_0808 0.29 -1.2 818,252 + Dsui_0808 0.29 +1.0 818,255 - Dsui_0808 0.29 -2.7 818,255 - Dsui_0808 0.29 -0.3 818,271 - Dsui_0808 0.30 +0.8 818,302 + Dsui_0808 0.32 +1.9 818,360 + Dsui_0808 0.36 +0.0 818,391 + Dsui_0808 0.39 -0.4 818,394 - Dsui_0808 0.39 +0.5 818,406 + Dsui_0808 0.40 +0.8 818,411 + Dsui_0808 0.40 -0.4 818,432 + Dsui_0808 0.41 -0.6 818,432 + Dsui_0808 0.41 -1.0 818,435 - Dsui_0808 0.42 -0.4 818,440 - Dsui_0808 0.42 +1.2 818,440 - Dsui_0808 0.42 +0.3 818,440 - Dsui_0808 0.42 +0.3 818,440 - Dsui_0808 0.42 +0.1 818,443 - Dsui_0808 0.42 -2.5 818,445 + Dsui_0808 0.42 +0.6 818,458 - Dsui_0808 0.43 -1.3 818,465 + Dsui_0808 0.44 -0.8 818,511 + Dsui_0808 0.47 -1.4 818,637 + Dsui_0808 0.56 -0.4 818,656 + Dsui_0808 0.57 -1.6 818,682 - Dsui_0808 0.59 -0.5 818,840 - Dsui_0808 0.70 -0.6 818,846 - Dsui_0808 0.70 -0.6 818,884 + Dsui_0808 0.73 -1.2 818,887 - Dsui_0808 0.73 -0.7 818,892 - Dsui_0808 0.74 +0.5 818,902 - Dsui_0808 0.74 -0.1 818,935 + Dsui_0808 0.77 -1.0 818,968 + Dsui_0808 0.79 -0.2 819,076 - Dsui_0808 0.86 +0.3 819,076 - Dsui_0808 0.86 +0.4 819,076 - Dsui_0808 0.86 -0.1 819,128 - -0.3 819,132 + -0.4 819,137 + -0.5 819,145 - -0.7 819,210 - -0.1 819,274 + -1.0 819,290 - +0.3 819,293 + -2.4 819,326 - -1.4 819,358 + +0.5 819,369 + -1.3 819,384 + +0.1 819,414 - -1.5
Or see this region's nucleotide sequence