Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0776 and Dsui_0777 are separated by 11 nucleotides Dsui_0777 and Dsui_0778 overlap by 4 nucleotides Dsui_0778 and Dsui_0779 are separated by 249 nucleotides
Dsui_0776: Dsui_0776 - PAS domain S-box, at 777,645 to 781,565
_0776
Dsui_0777: Dsui_0777 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 781,577 to 782,740
_0777
Dsui_0778: Dsui_0778 - small protein A (tmRNA-binding), at 782,737 to 783,222
_0778
Dsui_0779: Dsui_0779 - 5-methyltetrahydrofolate--homocysteine methyltransferase, at 783,472 to 787,152
_0779
Position (kb) 781
782
783 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 780.592 kb on + strand, within Dsui_0776 at 780.685 kb on + strand, within Dsui_0776 at 780.685 kb on + strand, within Dsui_0776 at 780.685 kb on + strand at 780.715 kb on + strand at 780.738 kb on - strand, within Dsui_0776 at 780.786 kb on - strand, within Dsui_0776 at 780.857 kb on + strand at 780.872 kb on - strand, within Dsui_0776 at 780.874 kb on + strand, within Dsui_0776 at 780.882 kb on - strand, within Dsui_0776 at 781.002 kb on - strand, within Dsui_0776 at 781.034 kb on + strand, within Dsui_0776 at 781.037 kb on - strand, within Dsui_0776 at 781.200 kb on + strand at 781.213 kb on - strand at 781.239 kb on - strand at 781.365 kb on - strand at 781.418 kb on - strand at 781.469 kb on - strand at 781.498 kb on - strand at 781.498 kb on - strand at 781.502 kb on + strand at 781.516 kb on - strand at 781.544 kb on - strand at 781.544 kb on - strand at 781.559 kb on + strand at 781.574 kb on + strand at 781.680 kb on + strand at 781.680 kb on + strand at 781.743 kb on + strand, within Dsui_0777 at 781.771 kb on + strand, within Dsui_0777 at 781.782 kb on + strand, within Dsui_0777 at 781.782 kb on + strand, within Dsui_0777 at 781.782 kb on + strand, within Dsui_0777 at 781.784 kb on - strand, within Dsui_0777 at 781.790 kb on - strand, within Dsui_0777 at 781.794 kb on + strand, within Dsui_0777 at 781.806 kb on + strand, within Dsui_0777 at 781.881 kb on + strand, within Dsui_0777 at 781.908 kb on + strand, within Dsui_0777 at 782.031 kb on + strand, within Dsui_0777 at 782.082 kb on - strand, within Dsui_0777 at 782.205 kb on - strand at 782.300 kb on - strand, within Dsui_0777 at 782.325 kb on + strand, within Dsui_0777 at 782.347 kb on + strand, within Dsui_0777 at 782.362 kb on - strand, within Dsui_0777 at 782.447 kb on + strand, within Dsui_0777 at 782.447 kb on + strand, within Dsui_0777 at 782.448 kb on + strand, within Dsui_0777 at 782.496 kb on - strand, within Dsui_0777 at 782.575 kb on - strand, within Dsui_0777 at 782.674 kb on + strand at 782.737 kb on + strand at 782.777 kb on - strand at 782.917 kb on - strand at 782.962 kb on - strand, within Dsui_0778 at 782.989 kb on - strand, within Dsui_0778 at 782.989 kb on - strand, within Dsui_0778 at 782.999 kb on - strand, within Dsui_0778 at 783.035 kb on + strand, within Dsui_0778 at 783.055 kb on + strand, within Dsui_0778 at 783.216 kb on + strand at 783.306 kb on + strand at 783.314 kb on - strand at 783.364 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 780,592 + Dsui_0776 0.75 -1.0 780,685 + Dsui_0776 0.78 -0.5 780,685 + Dsui_0776 0.78 -1.5 780,685 + -1.5 780,715 + +0.5 780,738 - Dsui_0776 0.79 +0.5 780,786 - Dsui_0776 0.80 +0.5 780,857 + +0.5 780,872 - Dsui_0776 0.82 -0.5 780,874 + Dsui_0776 0.82 -1.5 780,882 - Dsui_0776 0.83 -0.5 781,002 - Dsui_0776 0.86 -0.5 781,034 + Dsui_0776 0.86 -2.1 781,037 - Dsui_0776 0.87 -2.0 781,200 + +0.4 781,213 - -1.0 781,239 - -1.5 781,365 - -2.3 781,418 - +0.1 781,469 - +0.5 781,498 - +1.5 781,498 - +2.5 781,502 + -1.5 781,516 - -1.8 781,544 - +0.5 781,544 - +0.5 781,559 + -0.3 781,574 + -0.5 781,680 + -0.1 781,680 + -0.1 781,743 + Dsui_0777 0.14 +0.9 781,771 + Dsui_0777 0.17 -1.0 781,782 + Dsui_0777 0.18 -0.5 781,782 + Dsui_0777 0.18 -3.0 781,782 + Dsui_0777 0.18 -1.5 781,784 - Dsui_0777 0.18 -1.5 781,790 - Dsui_0777 0.18 -1.8 781,794 + Dsui_0777 0.19 -1.0 781,806 + Dsui_0777 0.20 -0.2 781,881 + Dsui_0777 0.26 -1.8 781,908 + Dsui_0777 0.28 -0.5 782,031 + Dsui_0777 0.39 +0.5 782,082 - Dsui_0777 0.43 -2.0 782,205 - +0.5 782,300 - Dsui_0777 0.62 -1.5 782,325 + Dsui_0777 0.64 -1.8 782,347 + Dsui_0777 0.66 -0.9 782,362 - Dsui_0777 0.67 -1.0 782,447 + Dsui_0777 0.75 -0.0 782,447 + Dsui_0777 0.75 -0.5 782,448 + Dsui_0777 0.75 +0.5 782,496 - Dsui_0777 0.79 -3.0 782,575 - Dsui_0777 0.86 -0.5 782,674 + -0.0 782,737 + -0.5 782,777 - +0.5 782,917 - +0.5 782,962 - Dsui_0778 0.46 -2.5 782,989 - Dsui_0778 0.52 -1.0 782,989 - Dsui_0778 0.52 -2.0 782,999 - Dsui_0778 0.54 -2.3 783,035 + Dsui_0778 0.61 -0.9 783,055 + Dsui_0778 0.65 -3.6 783,216 + -2.5 783,306 + +0.1 783,314 - -2.0 783,364 + -1.0
Or see this region's nucleotide sequence