Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0749 and Dsui_0750 are separated by 23 nucleotides Dsui_0750 and Dsui_0751 are separated by 1 nucleotides
Dsui_0749: Dsui_0749 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 747,299 to 750,160
_0749
Dsui_0750: Dsui_0750 - hypothetical protein, at 750,184 to 750,516
_0750
Dsui_0751: Dsui_0751 - Eco57I restriction endonuclease, at 750,518 to 751,729
_0751
Position (kb) 750
751 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 749.188 kb on + strand, within Dsui_0749 at 749.189 kb on + strand, within Dsui_0749 at 749.226 kb on + strand, within Dsui_0749 at 749.229 kb on - strand, within Dsui_0749 at 749.262 kb on + strand, within Dsui_0749 at 749.297 kb on + strand, within Dsui_0749 at 749.302 kb on + strand, within Dsui_0749 at 749.403 kb on + strand, within Dsui_0749 at 749.422 kb on - strand, within Dsui_0749 at 749.469 kb on - strand, within Dsui_0749 at 749.512 kb on + strand, within Dsui_0749 at 749.576 kb on + strand, within Dsui_0749 at 749.623 kb on - strand, within Dsui_0749 at 749.635 kb on - strand, within Dsui_0749 at 749.640 kb on - strand at 749.670 kb on + strand, within Dsui_0749 at 749.677 kb on + strand, within Dsui_0749 at 749.685 kb on - strand, within Dsui_0749 at 749.885 kb on + strand at 749.909 kb on + strand at 749.922 kb on - strand at 749.998 kb on - strand at 750.102 kb on - strand at 750.143 kb on - strand at 750.203 kb on + strand at 750.290 kb on - strand, within Dsui_0750 at 750.373 kb on + strand, within Dsui_0750 at 750.387 kb on + strand at 750.399 kb on + strand, within Dsui_0750 at 750.399 kb on + strand, within Dsui_0750 at 750.407 kb on - strand, within Dsui_0750 at 750.419 kb on - strand, within Dsui_0750 at 750.425 kb on - strand, within Dsui_0750 at 750.560 kb on + strand at 750.577 kb on - strand at 750.620 kb on + strand at 750.706 kb on - strand, within Dsui_0751 at 750.797 kb on - strand, within Dsui_0751 at 750.840 kb on - strand, within Dsui_0751 at 750.947 kb on + strand at 750.965 kb on + strand, within Dsui_0751 at 750.980 kb on - strand, within Dsui_0751 at 751.044 kb on + strand, within Dsui_0751 at 751.051 kb on + strand, within Dsui_0751 at 751.052 kb on - strand, within Dsui_0751 at 751.059 kb on - strand, within Dsui_0751 at 751.106 kb on - strand, within Dsui_0751 at 751.170 kb on - strand, within Dsui_0751 at 751.184 kb on - strand, within Dsui_0751 at 751.188 kb on + strand, within Dsui_0751 at 751.191 kb on - strand, within Dsui_0751 at 751.193 kb on + strand, within Dsui_0751 at 751.317 kb on - strand, within Dsui_0751 at 751.398 kb on - strand, within Dsui_0751 at 751.458 kb on + strand, within Dsui_0751 at 751.458 kb on + strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.509 kb on - strand, within Dsui_0751 at 751.514 kb on - strand, within Dsui_0751
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 749,188 + Dsui_0749 0.66 +0.2 749,189 + Dsui_0749 0.66 -0.3 749,226 + Dsui_0749 0.67 -0.2 749,229 - Dsui_0749 0.67 -0.5 749,262 + Dsui_0749 0.69 -0.2 749,297 + Dsui_0749 0.70 +0.4 749,302 + Dsui_0749 0.70 -0.2 749,403 + Dsui_0749 0.74 -0.0 749,422 - Dsui_0749 0.74 +0.5 749,469 - Dsui_0749 0.76 -0.5 749,512 + Dsui_0749 0.77 -0.2 749,576 + Dsui_0749 0.80 +2.3 749,623 - Dsui_0749 0.81 -0.5 749,635 - Dsui_0749 0.82 -2.5 749,640 - -0.5 749,670 + Dsui_0749 0.83 -1.1 749,677 + Dsui_0749 0.83 +0.1 749,685 - Dsui_0749 0.83 -0.4 749,885 + -0.1 749,909 + -0.5 749,922 - +0.5 749,998 - +1.1 750,102 - +0.5 750,143 - +0.5 750,203 + -3.2 750,290 - Dsui_0750 0.32 -0.8 750,373 + Dsui_0750 0.57 -1.5 750,387 + -0.5 750,399 + Dsui_0750 0.65 -0.5 750,399 + Dsui_0750 0.65 -0.5 750,407 - Dsui_0750 0.67 -1.2 750,419 - Dsui_0750 0.71 -0.1 750,425 - Dsui_0750 0.72 -0.5 750,560 + -2.1 750,577 - -1.4 750,620 + -2.5 750,706 - Dsui_0751 0.16 -3.7 750,797 - Dsui_0751 0.23 -1.4 750,840 - Dsui_0751 0.27 -2.9 750,947 + +0.5 750,965 + Dsui_0751 0.37 -0.5 750,980 - Dsui_0751 0.38 -1.1 751,044 + Dsui_0751 0.43 -2.9 751,051 + Dsui_0751 0.44 -1.1 751,052 - Dsui_0751 0.44 -2.3 751,059 - Dsui_0751 0.45 -1.5 751,106 - Dsui_0751 0.49 -1.0 751,170 - Dsui_0751 0.54 -1.2 751,184 - Dsui_0751 0.55 -1.5 751,188 + Dsui_0751 0.55 +0.5 751,191 - Dsui_0751 0.56 -2.1 751,193 + Dsui_0751 0.56 -1.1 751,317 - Dsui_0751 0.66 -2.5 751,398 - Dsui_0751 0.73 -2.1 751,458 + Dsui_0751 0.78 -0.5 751,458 + Dsui_0751 0.78 -1.8 751,466 - Dsui_0751 0.78 -0.8 751,466 - Dsui_0751 0.78 -1.6 751,466 - Dsui_0751 0.78 -1.7 751,509 - Dsui_0751 0.82 -1.5 751,514 - Dsui_0751 0.82 -2.2
Or see this region's nucleotide sequence