Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0745 and Dsui_0746 overlap by 13 nucleotides Dsui_0746 and Dsui_0747 are separated by 94 nucleotides
Dsui_0745: Dsui_0745 - membrane-associated lipoprotein involved in thiamine biosynthesis, at 742,780 to 743,820
_0745
Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755
_0746
Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130
_0747
Position (kb)
743
744
745 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 742.811 kb on - strand at 742.811 kb on - strand at 742.954 kb on - strand, within Dsui_0745 at 742.959 kb on - strand, within Dsui_0745 at 743.025 kb on - strand, within Dsui_0745 at 743.076 kb on + strand at 743.138 kb on - strand, within Dsui_0745 at 743.281 kb on + strand, within Dsui_0745 at 743.771 kb on + strand at 743.863 kb on - strand at 743.955 kb on - strand, within Dsui_0746 at 744.017 kb on + strand, within Dsui_0746 at 744.104 kb on - strand, within Dsui_0746 at 744.137 kb on - strand, within Dsui_0746 at 744.152 kb on - strand, within Dsui_0746 at 744.165 kb on + strand, within Dsui_0746 at 744.192 kb on + strand, within Dsui_0746 at 744.245 kb on + strand at 744.325 kb on - strand, within Dsui_0746 at 744.350 kb on - strand, within Dsui_0746 at 744.358 kb on - strand, within Dsui_0746 at 744.403 kb on + strand, within Dsui_0746 at 744.436 kb on + strand, within Dsui_0746 at 744.438 kb on - strand, within Dsui_0746 at 744.455 kb on + strand at 744.459 kb on + strand at 744.471 kb on - strand, within Dsui_0746 at 744.545 kb on - strand, within Dsui_0746 at 744.626 kb on + strand, within Dsui_0746 at 744.626 kb on + strand, within Dsui_0746 at 744.654 kb on + strand, within Dsui_0746 at 744.712 kb on + strand at 744.712 kb on + strand at 744.712 kb on + strand at 744.717 kb on + strand at 744.720 kb on - strand at 744.722 kb on + strand at 744.722 kb on + strand at 744.803 kb on + strand at 744.829 kb on - strand at 744.840 kb on + strand at 744.955 kb on - strand at 744.999 kb on - strand, within Dsui_0747 at 745.019 kb on - strand, within Dsui_0747 at 745.143 kb on - strand, within Dsui_0747 at 745.178 kb on - strand, within Dsui_0747 at 745.189 kb on - strand, within Dsui_0747 at 745.607 kb on - strand, within Dsui_0747 at 745.614 kb on + strand at 745.683 kb on + strand, within Dsui_0747 at 745.701 kb on + strand, within Dsui_0747 at 745.709 kb on - strand, within Dsui_0747
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 742,811 - -0.2 742,811 - +0.7 742,954 - Dsui_0745 0.17 -1.7 742,959 - Dsui_0745 0.17 -1.0 743,025 - Dsui_0745 0.24 +0.3 743,076 + +0.5 743,138 - Dsui_0745 0.34 -0.4 743,281 + Dsui_0745 0.48 -0.5 743,771 + +0.5 743,863 - +0.2 743,955 - Dsui_0746 0.16 +0.9 744,017 + Dsui_0746 0.22 -3.2 744,104 - Dsui_0746 0.31 -0.3 744,137 - Dsui_0746 0.35 -0.0 744,152 - Dsui_0746 0.36 +0.7 744,165 + Dsui_0746 0.38 -1.5 744,192 + Dsui_0746 0.41 +0.5 744,245 + -0.5 744,325 - Dsui_0746 0.55 -0.3 744,350 - Dsui_0746 0.57 -0.3 744,358 - Dsui_0746 0.58 -0.3 744,403 + Dsui_0746 0.63 -1.5 744,436 + Dsui_0746 0.66 -1.1 744,438 - Dsui_0746 0.66 +0.5 744,455 + +0.5 744,459 + +0.5 744,471 - Dsui_0746 0.70 +0.0 744,545 - Dsui_0746 0.78 -0.8 744,626 + Dsui_0746 0.86 +0.5 744,626 + Dsui_0746 0.86 -0.5 744,654 + Dsui_0746 0.89 +0.5 744,712 + -2.3 744,712 + +0.5 744,712 + -0.5 744,717 + -1.5 744,720 - +0.4 744,722 + -1.1 744,722 + -1.1 744,803 + +0.5 744,829 - -0.1 744,840 + +0.5 744,955 - -2.1 744,999 - Dsui_0747 0.12 -5.7 745,019 - Dsui_0747 0.13 -3.6 745,143 - Dsui_0747 0.23 -1.1 745,178 - Dsui_0747 0.26 -3.7 745,189 - Dsui_0747 0.26 -2.7 745,607 - Dsui_0747 0.59 -2.0 745,614 + -0.5 745,683 + Dsui_0747 0.65 -1.1 745,701 + Dsui_0747 0.66 -1.8 745,709 - Dsui_0747 0.67 -3.6
Or see this region's nucleotide sequence