Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0736 and Dsui_0737 are separated by 82 nucleotides Dsui_0737 and Dsui_0738 are separated by 14 nucleotides Dsui_0738 and Dsui_0739 are separated by 15 nucleotides
Dsui_0736: Dsui_0736 - FAD/FMN-dependent dehydrogenase, at 732,078 to 735,956
_0736
Dsui_0737: Dsui_0737 - hypothetical protein, at 736,039 to 736,134
_0737
Dsui_0738: Dsui_0738 - secondary thiamine-phosphate synthase enzyme, at 736,149 to 736,568
_0738
Dsui_0739: Dsui_0739 - Major Facilitator Superfamily transporter, at 736,584 to 738,125
_0739
Position (kb) 736
737 Strain fitness (log2 ratio) -2
-1
0
1 at 736.051 kb on - strand, within Dsui_0737 at 736.063 kb on + strand, within Dsui_0737 at 736.107 kb on + strand, within Dsui_0737 at 736.129 kb on + strand at 736.191 kb on - strand, within Dsui_0738 at 736.506 kb on - strand, within Dsui_0738 at 736.572 kb on - strand at 736.572 kb on - strand at 736.692 kb on + strand at 736.837 kb on - strand, within Dsui_0739 at 736.980 kb on - strand, within Dsui_0739 at 737.049 kb on + strand, within Dsui_0739 at 737.054 kb on + strand, within Dsui_0739 at 737.057 kb on - strand, within Dsui_0739 at 737.062 kb on - strand, within Dsui_0739 at 737.065 kb on + strand, within Dsui_0739 at 737.150 kb on - strand, within Dsui_0739 at 737.169 kb on - strand, within Dsui_0739 at 737.217 kb on - strand, within Dsui_0739 at 737.238 kb on + strand, within Dsui_0739 at 737.319 kb on + strand, within Dsui_0739 at 737.327 kb on - strand, within Dsui_0739 at 737.379 kb on - strand, within Dsui_0739 at 737.392 kb on - strand, within Dsui_0739 at 737.420 kb on - strand, within Dsui_0739 at 737.421 kb on + strand at 737.493 kb on + strand, within Dsui_0739
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 736,051 - Dsui_0737 0.12 -1.1 736,063 + Dsui_0737 0.25 +0.0 736,107 + Dsui_0737 0.71 -0.0 736,129 + +0.1 736,191 - Dsui_0738 0.10 +0.7 736,506 - Dsui_0738 0.85 +0.8 736,572 - -1.1 736,572 - +0.1 736,692 + -2.3 736,837 - Dsui_0739 0.16 -1.4 736,980 - Dsui_0739 0.26 -0.5 737,049 + Dsui_0739 0.30 +0.5 737,054 + Dsui_0739 0.30 +0.5 737,057 - Dsui_0739 0.31 -1.6 737,062 - Dsui_0739 0.31 -0.9 737,065 + Dsui_0739 0.31 -1.5 737,150 - Dsui_0739 0.37 -0.2 737,169 - Dsui_0739 0.38 -0.8 737,217 - Dsui_0739 0.41 +0.6 737,238 + Dsui_0739 0.42 -1.8 737,319 + Dsui_0739 0.48 +0.5 737,327 - Dsui_0739 0.48 -0.7 737,379 - Dsui_0739 0.52 -1.2 737,392 - Dsui_0739 0.52 -0.9 737,420 - Dsui_0739 0.54 -0.1 737,421 + +0.5 737,493 + Dsui_0739 0.59 -0.5
Or see this region's nucleotide sequence