Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0624 and Dsui_0625 are separated by 2 nucleotides Dsui_0625 and Dsui_0626 are separated by 2 nucleotides Dsui_0626 and Dsui_0627 overlap by 8 nucleotides
Dsui_0624: Dsui_0624 - hypothetical protein, at 618,501 to 619,610
_0624
Dsui_0625: Dsui_0625 - putative metal-sulfur cluster biosynthetic enzyme, at 619,613 to 619,924
_0625
Dsui_0626: Dsui_0626 - ABC-type branched-chain amino acid transport systems, ATPase component, at 619,927 to 620,643
_0626
Dsui_0627: Dsui_0627 - ABC-type branched-chain amino acid transport systems, ATPase component, at 620,636 to 621,439
_0627
Position (kb) 619
620 Strain fitness (log2 ratio) -2
-1
0
1 at 618.667 kb on - strand, within Dsui_0624 at 618.995 kb on + strand at 619.000 kb on + strand at 619.110 kb on + strand, within Dsui_0624 at 619.591 kb on + strand at 619.660 kb on - strand, within Dsui_0625 at 619.693 kb on + strand, within Dsui_0625 at 619.701 kb on - strand, within Dsui_0625 at 619.752 kb on - strand, within Dsui_0625 at 619.827 kb on + strand, within Dsui_0625 at 619.835 kb on - strand, within Dsui_0625 at 619.856 kb on - strand, within Dsui_0625 at 619.891 kb on - strand, within Dsui_0625 at 619.896 kb on - strand at 619.946 kb on + strand at 619.987 kb on + strand at 620.177 kb on - strand, within Dsui_0626 at 620.177 kb on - strand, within Dsui_0626 at 620.310 kb on - strand, within Dsui_0626 at 620.336 kb on + strand, within Dsui_0626 at 620.496 kb on - strand, within Dsui_0626 at 620.502 kb on + strand, within Dsui_0626 at 620.639 kb on + strand at 620.642 kb on - strand at 620.820 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 618,667 - Dsui_0624 0.15 -0.7 618,995 + +0.5 619,000 + -0.5 619,110 + Dsui_0624 0.55 -2.7 619,591 + +0.5 619,660 - Dsui_0625 0.15 -0.6 619,693 + Dsui_0625 0.26 +0.5 619,701 - Dsui_0625 0.28 -0.7 619,752 - Dsui_0625 0.45 -0.3 619,827 + Dsui_0625 0.69 -1.5 619,835 - Dsui_0625 0.71 -1.4 619,856 - Dsui_0625 0.78 -0.1 619,891 - Dsui_0625 0.89 -1.6 619,896 - -0.0 619,946 + -2.3 619,987 + -2.1 620,177 - Dsui_0626 0.35 -0.5 620,177 - Dsui_0626 0.35 -0.3 620,310 - Dsui_0626 0.53 -1.7 620,336 + Dsui_0626 0.57 +0.5 620,496 - Dsui_0626 0.79 -0.6 620,502 + Dsui_0626 0.80 -1.5 620,639 + -0.5 620,642 - -1.8 620,820 + +0.5
Or see this region's nucleotide sequence