Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0575 and Dsui_0576 are separated by 21 nucleotides Dsui_0576 and Dsui_0577 overlap by 8 nucleotides Dsui_0577 and Dsui_0578 are separated by 14 nucleotides
Dsui_0575: Dsui_0575 - electron transfer flavoprotein, alpha subunit, at 573,191 to 574,273
_0575
Dsui_0576: Dsui_0576 - electron transfer flavoprotein, beta subunit, at 574,295 to 575,140
_0576
Dsui_0577: Dsui_0577 - Nitrogen fixation protein NifW, at 575,133 to 575,465
_0577
Dsui_0578: Dsui_0578 - homocitrate synthase NifV, at 575,480 to 576,634
_0578
Position (kb) 575
576 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 574.155 kb on - strand, within Dsui_0575 at 574.202 kb on - strand at 574.273 kb on + strand at 574.283 kb on + strand at 574.301 kb on - strand at 574.341 kb on + strand at 574.344 kb on - strand at 574.349 kb on - strand at 574.360 kb on - strand at 574.362 kb on + strand at 574.461 kb on - strand, within Dsui_0576 at 574.519 kb on + strand, within Dsui_0576 at 574.591 kb on - strand, within Dsui_0576 at 574.592 kb on - strand, within Dsui_0576 at 575.106 kb on + strand at 575.116 kb on + strand at 575.124 kb on - strand at 575.135 kb on + strand at 575.150 kb on + strand at 575.150 kb on + strand at 575.195 kb on - strand, within Dsui_0577 at 575.329 kb on + strand, within Dsui_0577 at 575.348 kb on + strand, within Dsui_0577 at 575.348 kb on + strand, within Dsui_0577 at 575.467 kb on + strand at 575.470 kb on - strand at 575.556 kb on - strand at 575.578 kb on - strand at 575.604 kb on - strand, within Dsui_0578 at 575.628 kb on - strand, within Dsui_0578 at 575.706 kb on + strand, within Dsui_0578 at 575.962 kb on + strand, within Dsui_0578 at 575.977 kb on - strand, within Dsui_0578 at 575.982 kb on + strand, within Dsui_0578 at 575.990 kb on - strand, within Dsui_0578 at 576.216 kb on - strand, within Dsui_0578 at 576.271 kb on - strand, within Dsui_0578 at 576.399 kb on - strand, within Dsui_0578 at 576.424 kb on + strand, within Dsui_0578 at 576.431 kb on - strand, within Dsui_0578 at 576.450 kb on - strand, within Dsui_0578
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 574,155 - Dsui_0575 0.89 -1.5 574,202 - -0.5 574,273 + -1.1 574,283 + +0.5 574,301 - -1.1 574,341 + +0.5 574,344 - -0.5 574,349 - -1.5 574,360 - -1.9 574,362 + -0.5 574,461 - Dsui_0576 0.20 +0.5 574,519 + Dsui_0576 0.26 -1.5 574,591 - Dsui_0576 0.35 -1.5 574,592 - Dsui_0576 0.35 +0.5 575,106 + -1.5 575,116 + +0.5 575,124 - +0.5 575,135 + -1.1 575,150 + +0.5 575,150 + +0.5 575,195 - Dsui_0577 0.19 -2.7 575,329 + Dsui_0577 0.59 -1.1 575,348 + Dsui_0577 0.65 +0.5 575,348 + Dsui_0577 0.65 +0.5 575,467 + -0.5 575,470 - -3.1 575,556 - -1.1 575,578 - -0.5 575,604 - Dsui_0578 0.11 -0.5 575,628 - Dsui_0578 0.13 +0.5 575,706 + Dsui_0578 0.20 +0.5 575,962 + Dsui_0578 0.42 -2.1 575,977 - Dsui_0578 0.43 -0.5 575,982 + Dsui_0578 0.43 -0.5 575,990 - Dsui_0578 0.44 -1.9 576,216 - Dsui_0578 0.64 -1.1 576,271 - Dsui_0578 0.68 -1.1 576,399 - Dsui_0578 0.80 +0.5 576,424 + Dsui_0578 0.82 -1.9 576,431 - Dsui_0578 0.82 -0.5 576,450 - Dsui_0578 0.84 +0.5
Or see this region's nucleotide sequence