Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0328 and Dsui_0329 are separated by 49 nucleotides Dsui_0329 and Dsui_0330 overlap by 4 nucleotides Dsui_0330 and Dsui_0331 overlap by 4 nucleotides
Dsui_0328: Dsui_0328 - fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly, at 334,576 to 336,405
_0328
Dsui_0329: Dsui_0329 - PAS domain S-box, at 336,455 to 339,163
_0329
Dsui_0330: Dsui_0330 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 339,160 to 340,053
_0330
Dsui_0331: Dsui_0331 - PAS domain S-box, at 340,050 to 341,588
_0331
Position (kb)
336
337
338
339
340 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 335.466 kb on + strand, within Dsui_0328 at 335.474 kb on - strand, within Dsui_0328 at 335.497 kb on + strand, within Dsui_0328 at 335.609 kb on + strand, within Dsui_0328 at 335.634 kb on - strand, within Dsui_0328 at 335.697 kb on + strand, within Dsui_0328 at 335.705 kb on - strand, within Dsui_0328 at 335.724 kb on - strand, within Dsui_0328 at 335.731 kb on - strand, within Dsui_0328 at 335.737 kb on + strand, within Dsui_0328 at 335.739 kb on - strand, within Dsui_0328 at 335.890 kb on + strand, within Dsui_0328 at 335.890 kb on + strand, within Dsui_0328 at 335.952 kb on - strand, within Dsui_0328 at 336.067 kb on - strand, within Dsui_0328 at 336.136 kb on + strand, within Dsui_0328 at 336.152 kb on - strand, within Dsui_0328 at 336.152 kb on - strand, within Dsui_0328 at 336.230 kb on - strand at 336.330 kb on + strand at 336.330 kb on + strand at 336.333 kb on - strand at 336.391 kb on - strand at 336.394 kb on + strand at 336.465 kb on - strand at 336.484 kb on - strand at 336.595 kb on - strand at 336.689 kb on - strand at 336.765 kb on + strand, within Dsui_0329 at 336.803 kb on - strand at 336.843 kb on - strand, within Dsui_0329 at 336.905 kb on - strand, within Dsui_0329 at 337.106 kb on + strand, within Dsui_0329 at 337.111 kb on + strand, within Dsui_0329 at 337.114 kb on - strand, within Dsui_0329 at 337.134 kb on + strand, within Dsui_0329 at 337.160 kb on + strand, within Dsui_0329 at 337.160 kb on + strand, within Dsui_0329 at 337.160 kb on + strand, within Dsui_0329 at 337.165 kb on + strand, within Dsui_0329 at 337.168 kb on - strand at 337.183 kb on + strand, within Dsui_0329 at 337.183 kb on + strand, within Dsui_0329 at 337.192 kb on + strand, within Dsui_0329 at 337.209 kb on + strand, within Dsui_0329 at 337.217 kb on - strand, within Dsui_0329 at 337.217 kb on - strand, within Dsui_0329 at 337.401 kb on + strand, within Dsui_0329 at 337.419 kb on - strand at 337.473 kb on + strand, within Dsui_0329 at 337.579 kb on + strand, within Dsui_0329 at 337.856 kb on - strand at 337.979 kb on - strand, within Dsui_0329 at 337.988 kb on + strand, within Dsui_0329 at 337.998 kb on - strand at 338.028 kb on - strand at 338.088 kb on - strand at 338.141 kb on - strand, within Dsui_0329 at 338.293 kb on - strand, within Dsui_0329 at 338.293 kb on - strand, within Dsui_0329 at 338.378 kb on - strand, within Dsui_0329 at 338.378 kb on - strand, within Dsui_0329 at 338.460 kb on - strand, within Dsui_0329 at 338.474 kb on + strand, within Dsui_0329 at 338.514 kb on - strand, within Dsui_0329 at 338.539 kb on + strand, within Dsui_0329 at 338.596 kb on - strand at 338.616 kb on - strand, within Dsui_0329 at 338.752 kb on + strand, within Dsui_0329 at 338.752 kb on + strand, within Dsui_0329 at 338.765 kb on + strand, within Dsui_0329 at 338.808 kb on - strand, within Dsui_0329 at 338.847 kb on + strand, within Dsui_0329 at 338.945 kb on + strand at 338.963 kb on - strand at 338.963 kb on - strand at 339.020 kb on + strand at 339.021 kb on + strand at 339.079 kb on - strand at 339.156 kb on + strand at 339.172 kb on - strand at 339.240 kb on + strand at 339.251 kb on - strand, within Dsui_0330 at 339.259 kb on - strand, within Dsui_0330 at 339.278 kb on - strand, within Dsui_0330 at 339.354 kb on + strand, within Dsui_0330 at 339.363 kb on + strand, within Dsui_0330 at 339.427 kb on + strand, within Dsui_0330 at 339.450 kb on + strand, within Dsui_0330 at 339.470 kb on - strand, within Dsui_0330 at 339.525 kb on - strand, within Dsui_0330 at 339.528 kb on + strand, within Dsui_0330 at 339.555 kb on - strand, within Dsui_0330 at 339.572 kb on + strand, within Dsui_0330 at 339.578 kb on - strand, within Dsui_0330 at 339.652 kb on + strand, within Dsui_0330 at 339.652 kb on + strand, within Dsui_0330 at 339.657 kb on + strand, within Dsui_0330 at 339.660 kb on - strand, within Dsui_0330 at 339.665 kb on - strand, within Dsui_0330 at 339.683 kb on + strand, within Dsui_0330 at 339.886 kb on - strand, within Dsui_0330 at 339.886 kb on - strand, within Dsui_0330 at 339.888 kb on + strand, within Dsui_0330 at 339.972 kb on - strand at 340.013 kb on - strand at 340.021 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 335,466 + Dsui_0328 0.49 +0.5 335,474 - Dsui_0328 0.49 -1.1 335,497 + Dsui_0328 0.50 -0.3 335,609 + Dsui_0328 0.56 +1.1 335,634 - Dsui_0328 0.58 -0.5 335,697 + Dsui_0328 0.61 +1.5 335,705 - Dsui_0328 0.62 +0.5 335,724 - Dsui_0328 0.63 +0.5 335,731 - Dsui_0328 0.63 +0.5 335,737 + Dsui_0328 0.63 -2.7 335,739 - Dsui_0328 0.64 -0.5 335,890 + Dsui_0328 0.72 -0.2 335,890 + Dsui_0328 0.72 -3.0 335,952 - Dsui_0328 0.75 -2.1 336,067 - Dsui_0328 0.81 +0.5 336,136 + Dsui_0328 0.85 -0.1 336,152 - Dsui_0328 0.86 +0.5 336,152 - Dsui_0328 0.86 +0.5 336,230 - -2.3 336,330 + -0.6 336,330 + -1.8 336,333 - -0.5 336,391 - -0.5 336,394 + -0.4 336,465 - -1.1 336,484 - +0.5 336,595 - -1.5 336,689 - -1.5 336,765 + Dsui_0329 0.11 +0.4 336,803 - +0.5 336,843 - Dsui_0329 0.14 +0.5 336,905 - Dsui_0329 0.17 +0.5 337,106 + Dsui_0329 0.24 -2.1 337,111 + Dsui_0329 0.24 -1.1 337,114 - Dsui_0329 0.24 -1.1 337,134 + Dsui_0329 0.25 -1.4 337,160 + Dsui_0329 0.26 -0.2 337,160 + Dsui_0329 0.26 +0.3 337,160 + Dsui_0329 0.26 -2.5 337,165 + Dsui_0329 0.26 -2.0 337,168 - +0.5 337,183 + Dsui_0329 0.27 -2.1 337,183 + Dsui_0329 0.27 -2.2 337,192 + Dsui_0329 0.27 -1.1 337,209 + Dsui_0329 0.28 +0.0 337,217 - Dsui_0329 0.28 +0.5 337,217 - Dsui_0329 0.28 +0.5 337,401 + Dsui_0329 0.35 -1.1 337,419 - -0.5 337,473 + Dsui_0329 0.38 +0.5 337,579 + Dsui_0329 0.41 -1.8 337,856 - +0.5 337,979 - Dsui_0329 0.56 -1.1 337,988 + Dsui_0329 0.57 -1.5 337,998 - +0.5 338,028 - +0.5 338,088 - +0.5 338,141 - Dsui_0329 0.62 -1.5 338,293 - Dsui_0329 0.68 +0.5 338,293 - Dsui_0329 0.68 +0.5 338,378 - Dsui_0329 0.71 -2.1 338,378 - Dsui_0329 0.71 -1.1 338,460 - Dsui_0329 0.74 -0.5 338,474 + Dsui_0329 0.75 -1.1 338,514 - Dsui_0329 0.76 +0.5 338,539 + Dsui_0329 0.77 -1.1 338,596 - +0.5 338,616 - Dsui_0329 0.80 +0.5 338,752 + Dsui_0329 0.85 -0.4 338,752 + Dsui_0329 0.85 -0.4 338,765 + Dsui_0329 0.85 +1.2 338,808 - Dsui_0329 0.87 -1.6 338,847 + Dsui_0329 0.88 -0.2 338,945 + +0.1 338,963 - -0.5 338,963 - +0.5 339,020 + -0.2 339,021 + -1.8 339,079 - +0.5 339,156 + -1.9 339,172 - -1.8 339,240 + -0.1 339,251 - Dsui_0330 0.10 +0.5 339,259 - Dsui_0330 0.11 +1.5 339,278 - Dsui_0330 0.13 -1.5 339,354 + Dsui_0330 0.22 +1.8 339,363 + Dsui_0330 0.23 -0.1 339,427 + Dsui_0330 0.30 -1.0 339,450 + Dsui_0330 0.32 -0.3 339,470 - Dsui_0330 0.35 +0.5 339,525 - Dsui_0330 0.41 +0.5 339,528 + Dsui_0330 0.41 -1.0 339,555 - Dsui_0330 0.44 -2.5 339,572 + Dsui_0330 0.46 -1.1 339,578 - Dsui_0330 0.47 -1.5 339,652 + Dsui_0330 0.55 -0.3 339,652 + Dsui_0330 0.55 -0.5 339,657 + Dsui_0330 0.56 -0.2 339,660 - Dsui_0330 0.56 -0.5 339,665 - Dsui_0330 0.56 +0.5 339,683 + Dsui_0330 0.59 +0.2 339,886 - Dsui_0330 0.81 -0.5 339,886 - Dsui_0330 0.81 -0.5 339,888 + Dsui_0330 0.81 -1.3 339,972 - -0.5 340,013 - -2.1 340,021 + -0.4
Or see this region's nucleotide sequence