Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0178 and Dsui_0179 are separated by 15 nucleotides Dsui_0179 and Dsui_0180 are separated by 1 nucleotides Dsui_0180 and Dsui_0181 are separated by 180 nucleotides Dsui_0181 and Dsui_0182 are separated by 393 nucleotides
Dsui_0178: Dsui_0178 - hypothetical protein, at 181,670 to 182,509
_0178
Dsui_0179: Dsui_0179 - hypothetical protein, at 182,525 to 182,614
_0179
Dsui_0180: Dsui_0180 - hypothetical protein, at 182,616 to 182,885
_0180
Dsui_0181: Dsui_0181 - hypothetical protein, at 183,066 to 183,296
_0181
Dsui_0182: Dsui_0182 - hypothetical protein, at 183,690 to 184,331
_0182
Position (kb)
183
184 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 182.114 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.280 kb on + strand, within Dsui_0178 at 182.546 kb on + strand, within Dsui_0179 at 182.546 kb on + strand, within Dsui_0179 at 182.681 kb on + strand, within Dsui_0180 at 182.681 kb on + strand, within Dsui_0180 at 182.708 kb on - strand, within Dsui_0180 at 182.756 kb on - strand, within Dsui_0180 at 182.764 kb on - strand, within Dsui_0180 at 183.045 kb on + strand at 183.089 kb on - strand, within Dsui_0181 at 183.210 kb on + strand, within Dsui_0181 at 183.315 kb on + strand at 183.336 kb on + strand at 183.344 kb on - strand at 183.428 kb on - strand at 183.501 kb on + strand at 183.540 kb on + strand at 183.545 kb on + strand at 183.590 kb on - strand at 183.619 kb on - strand at 183.622 kb on + strand at 183.634 kb on + strand at 183.743 kb on - strand at 183.743 kb on - strand at 183.762 kb on - strand, within Dsui_0182 at 183.768 kb on - strand, within Dsui_0182 at 183.768 kb on - strand, within Dsui_0182 at 183.773 kb on - strand, within Dsui_0182 at 183.786 kb on + strand, within Dsui_0182 at 183.848 kb on - strand, within Dsui_0182 at 183.861 kb on + strand, within Dsui_0182 at 183.863 kb on + strand, within Dsui_0182 at 183.936 kb on + strand, within Dsui_0182 at 183.947 kb on - strand, within Dsui_0182 at 183.994 kb on + strand, within Dsui_0182 at 183.997 kb on - strand, within Dsui_0182 at 184.014 kb on + strand, within Dsui_0182 at 184.022 kb on - strand, within Dsui_0182 at 184.066 kb on + strand, within Dsui_0182 at 184.066 kb on + strand, within Dsui_0182 at 184.067 kb on + strand, within Dsui_0182 at 184.067 kb on + strand, within Dsui_0182 at 184.075 kb on - strand, within Dsui_0182 at 184.108 kb on - strand, within Dsui_0182 at 184.145 kb on + strand, within Dsui_0182 at 184.179 kb on - strand, within Dsui_0182
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 182,114 + Dsui_0178 0.53 -1.4 182,191 + Dsui_0178 0.62 +0.6 182,191 + Dsui_0178 0.62 +0.6 182,280 + Dsui_0178 0.73 -0.4 182,546 + Dsui_0179 0.23 -1.0 182,546 + Dsui_0179 0.23 -0.4 182,681 + Dsui_0180 0.24 +0.5 182,681 + Dsui_0180 0.24 -1.1 182,708 - Dsui_0180 0.34 +0.5 182,756 - Dsui_0180 0.52 -1.8 182,764 - Dsui_0180 0.55 +0.5 183,045 + +0.5 183,089 - Dsui_0181 0.10 +2.4 183,210 + Dsui_0181 0.62 +0.5 183,315 + -0.5 183,336 + +0.5 183,344 - +2.7 183,428 - +2.8 183,501 + -2.5 183,540 + -1.5 183,545 + +0.5 183,590 - +2.7 183,619 - +2.6 183,622 + -0.5 183,634 + -1.1 183,743 - +2.6 183,743 - +3.0 183,762 - Dsui_0182 0.11 +3.0 183,768 - Dsui_0182 0.12 +2.2 183,768 - Dsui_0182 0.12 +2.8 183,773 - Dsui_0182 0.13 +2.7 183,786 + Dsui_0182 0.15 -1.8 183,848 - Dsui_0182 0.25 +2.6 183,861 + Dsui_0182 0.27 +0.5 183,863 + Dsui_0182 0.27 +0.5 183,936 + Dsui_0182 0.38 -1.1 183,947 - Dsui_0182 0.40 +2.8 183,994 + Dsui_0182 0.47 -0.5 183,997 - Dsui_0182 0.48 +2.6 184,014 + Dsui_0182 0.50 -0.5 184,022 - Dsui_0182 0.52 +2.7 184,066 + Dsui_0182 0.59 +0.5 184,066 + Dsui_0182 0.59 -2.5 184,067 + Dsui_0182 0.59 -2.8 184,067 + Dsui_0182 0.59 -1.5 184,075 - Dsui_0182 0.60 +2.7 184,108 - Dsui_0182 0.65 +2.3 184,145 + Dsui_0182 0.71 -1.5 184,179 - Dsui_0182 0.76 +2.7
Or see this region's nucleotide sequence