Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25945 and BWI76_RS25950 are separated by 61 nucleotides BWI76_RS25950 and BWI76_RS25955 are separated by 4 nucleotides
BWI76_RS25945: BWI76_RS25945 - ABC transporter ATP-binding protein, at 5,362,869 to 5,364,773
_RS25945
BWI76_RS25950: BWI76_RS25950 - nicotinate phosphoribosyltransferase, at 5,364,835 to 5,366,325
_RS25950
BWI76_RS25955: BWI76_RS25955 - ribose-phosphate pyrophosphokinase, at 5,366,330 to 5,367,199
_RS25955
Position (kb) 5364
5365
5366
5367 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 5364.492 kb on - strand, within BWI76_RS25945 at 5364.690 kb on + strand at 5364.703 kb on + strand at 5364.736 kb on + strand at 5364.841 kb on - strand at 5364.876 kb on + strand at 5364.884 kb on - strand at 5364.944 kb on - strand at 5365.072 kb on - strand, within BWI76_RS25950 at 5365.128 kb on - strand, within BWI76_RS25950 at 5365.288 kb on + strand, within BWI76_RS25950 at 5365.408 kb on + strand, within BWI76_RS25950 at 5365.416 kb on - strand, within BWI76_RS25950 at 5365.686 kb on + strand, within BWI76_RS25950 at 5365.724 kb on + strand, within BWI76_RS25950 at 5365.724 kb on + strand, within BWI76_RS25950 at 5365.727 kb on - strand, within BWI76_RS25950 at 5365.727 kb on - strand, within BWI76_RS25950 at 5365.732 kb on - strand, within BWI76_RS25950 at 5365.870 kb on - strand, within BWI76_RS25950 at 5365.934 kb on - strand, within BWI76_RS25950 at 5366.113 kb on + strand, within BWI76_RS25950 at 5366.136 kb on - strand, within BWI76_RS25950 at 5366.453 kb on + strand at 5366.499 kb on - strand, within BWI76_RS25955 at 5366.516 kb on + strand, within BWI76_RS25955 at 5366.521 kb on + strand, within BWI76_RS25955 at 5366.522 kb on + strand, within BWI76_RS25955 at 5366.564 kb on - strand, within BWI76_RS25955 at 5366.619 kb on - strand, within BWI76_RS25955 at 5366.624 kb on - strand, within BWI76_RS25955 at 5366.705 kb on - strand, within BWI76_RS25955 at 5366.760 kb on + strand, within BWI76_RS25955 at 5366.782 kb on + strand, within BWI76_RS25955 at 5366.782 kb on + strand, within BWI76_RS25955 at 5366.788 kb on - strand, within BWI76_RS25955 at 5366.790 kb on - strand, within BWI76_RS25955 at 5366.876 kb on + strand, within BWI76_RS25955 at 5367.144 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,364,492 - BWI76_RS25945 0.85 +0.3 5,364,690 + -0.9 5,364,703 + -0.2 5,364,736 + -0.6 5,364,841 - +1.1 5,364,876 + +0.6 5,364,884 - -1.2 5,364,944 - -0.3 5,365,072 - BWI76_RS25950 0.16 +0.4 5,365,128 - BWI76_RS25950 0.20 -0.7 5,365,288 + BWI76_RS25950 0.30 +0.2 5,365,408 + BWI76_RS25950 0.38 +0.8 5,365,416 - BWI76_RS25950 0.39 +0.6 5,365,686 + BWI76_RS25950 0.57 +1.6 5,365,724 + BWI76_RS25950 0.60 +1.3 5,365,724 + BWI76_RS25950 0.60 +4.4 5,365,727 - BWI76_RS25950 0.60 -0.3 5,365,727 - BWI76_RS25950 0.60 +1.1 5,365,732 - BWI76_RS25950 0.60 +0.6 5,365,870 - BWI76_RS25950 0.69 +0.2 5,365,934 - BWI76_RS25950 0.74 +0.1 5,366,113 + BWI76_RS25950 0.86 +2.8 5,366,136 - BWI76_RS25950 0.87 +0.5 5,366,453 + +0.6 5,366,499 - BWI76_RS25955 0.19 +0.3 5,366,516 + BWI76_RS25955 0.21 +0.2 5,366,521 + BWI76_RS25955 0.22 -0.5 5,366,522 + BWI76_RS25955 0.22 +0.3 5,366,564 - BWI76_RS25955 0.27 -0.3 5,366,619 - BWI76_RS25955 0.33 -0.6 5,366,624 - BWI76_RS25955 0.34 -0.6 5,366,705 - BWI76_RS25955 0.43 -0.1 5,366,760 + BWI76_RS25955 0.49 +0.1 5,366,782 + BWI76_RS25955 0.52 +0.6 5,366,782 + BWI76_RS25955 0.52 -1.5 5,366,788 - BWI76_RS25955 0.53 -0.5 5,366,790 - BWI76_RS25955 0.53 +0.3 5,366,876 + BWI76_RS25955 0.63 -1.6 5,367,144 + +0.2
Or see this region's nucleotide sequence