Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23415

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23410 and BWI76_RS23415 are separated by 18 nucleotidesBWI76_RS23415 and BWI76_RS23420 are separated by 240 nucleotides BWI76_RS23410: BWI76_RS23410 - glycosyl hydrolase family 32, at 4,882,504 to 4,883,937 _RS23410 BWI76_RS23415: BWI76_RS23415 - MFS transporter, at 4,883,956 to 4,885,197 _RS23415 BWI76_RS23420: BWI76_RS23420 - LacI family transcriptional regulator, at 4,885,438 to 4,886,433 _RS23420 Position (kb) 4883 4884 4885 4886Strain fitness (log2 ratio) -3 -2 -1 0 1at 4883.008 kb on - strand, within BWI76_RS23410at 4883.109 kb on - strand, within BWI76_RS23410at 4883.600 kb on + strand, within BWI76_RS23410at 4883.600 kb on + strand, within BWI76_RS23410at 4883.608 kb on - strand, within BWI76_RS23410at 4883.760 kb on - strand, within BWI76_RS23410at 4883.804 kb on + strandat 4883.998 kb on - strandat 4884.048 kb on - strandat 4884.067 kb on + strandat 4884.165 kb on + strand, within BWI76_RS23415at 4884.165 kb on + strand, within BWI76_RS23415at 4884.197 kb on - strandat 4884.239 kb on + strand, within BWI76_RS23415at 4884.260 kb on - strand, within BWI76_RS23415at 4884.270 kb on + strand, within BWI76_RS23415at 4884.691 kb on + strand, within BWI76_RS23415at 4884.812 kb on + strand, within BWI76_RS23415at 4884.812 kb on + strand, within BWI76_RS23415at 4884.820 kb on - strand, within BWI76_RS23415at 4884.847 kb on + strand, within BWI76_RS23415at 4884.899 kb on - strand, within BWI76_RS23415at 4884.918 kb on - strand, within BWI76_RS23415at 4884.964 kb on + strand, within BWI76_RS23415at 4884.981 kb on + strand, within BWI76_RS23415at 4884.996 kb on + strand, within BWI76_RS23415at 4884.996 kb on + strand, within BWI76_RS23415at 4884.996 kb on + strand, within BWI76_RS23415at 4885.015 kb on - strand, within BWI76_RS23415at 4885.058 kb on - strand, within BWI76_RS23415at 4885.091 kb on - strandat 4885.115 kb on + strandat 4885.360 kb on + strandat 4885.506 kb on - strandat 4885.811 kb on + strand, within BWI76_RS23420at 4885.853 kb on - strand, within BWI76_RS23420at 4885.853 kb on - strand, within BWI76_RS23420at 4885.932 kb on + strand, within BWI76_RS23420at 4885.942 kb on + strand, within BWI76_RS23420at 4886.087 kb on + strand, within BWI76_RS23420

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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4,883,008 - BWI76_RS23410 0.35 +0.3
4,883,109 - BWI76_RS23410 0.42 +0.4
4,883,600 + BWI76_RS23410 0.76 -0.2
4,883,600 + BWI76_RS23410 0.76 -0.3
4,883,608 - BWI76_RS23410 0.77 +0.0
4,883,760 - BWI76_RS23410 0.88 -1.2
4,883,804 + -0.2
4,883,998 - +1.3
4,884,048 - -0.6
4,884,067 + +0.9
4,884,165 + BWI76_RS23415 0.17 -0.9
4,884,165 + BWI76_RS23415 0.17 +0.2
4,884,197 - +1.0
4,884,239 + BWI76_RS23415 0.23 -0.0
4,884,260 - BWI76_RS23415 0.24 -2.0
4,884,270 + BWI76_RS23415 0.25 -0.0
4,884,691 + BWI76_RS23415 0.59 -0.3
4,884,812 + BWI76_RS23415 0.69 +0.1
4,884,812 + BWI76_RS23415 0.69 +0.1
4,884,820 - BWI76_RS23415 0.70 -0.1
4,884,847 + BWI76_RS23415 0.72 -0.2
4,884,899 - BWI76_RS23415 0.76 -1.2
4,884,918 - BWI76_RS23415 0.77 -0.3
4,884,964 + BWI76_RS23415 0.81 -0.6
4,884,981 + BWI76_RS23415 0.83 -0.4
4,884,996 + BWI76_RS23415 0.84 +0.6
4,884,996 + BWI76_RS23415 0.84 -0.7
4,884,996 + BWI76_RS23415 0.84 -0.3
4,885,015 - BWI76_RS23415 0.85 +0.2
4,885,058 - BWI76_RS23415 0.89 +0.1
4,885,091 - -0.1
4,885,115 + +0.5
4,885,360 + +0.8
4,885,506 - -3.4
4,885,811 + BWI76_RS23420 0.37 -3.1
4,885,853 - BWI76_RS23420 0.42 -2.1
4,885,853 - BWI76_RS23420 0.42 -1.8
4,885,932 + BWI76_RS23420 0.50 -0.6
4,885,942 + BWI76_RS23420 0.51 -1.1
4,886,087 + BWI76_RS23420 0.65 -2.2

Or see this region's nucleotide sequence