Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23410 and BWI76_RS23415 are separated by 18 nucleotides BWI76_RS23415 and BWI76_RS23420 are separated by 240 nucleotides
BWI76_RS23410: BWI76_RS23410 - glycosyl hydrolase family 32, at 4,882,504 to 4,883,937
_RS23410
BWI76_RS23415: BWI76_RS23415 - MFS transporter, at 4,883,956 to 4,885,197
_RS23415
BWI76_RS23420: BWI76_RS23420 - LacI family transcriptional regulator, at 4,885,438 to 4,886,433
_RS23420
Position (kb)
4883
4884
4885
4886 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4883.008 kb on - strand, within BWI76_RS23410 at 4883.109 kb on - strand, within BWI76_RS23410 at 4883.600 kb on + strand, within BWI76_RS23410 at 4883.600 kb on + strand, within BWI76_RS23410 at 4883.608 kb on - strand, within BWI76_RS23410 at 4883.760 kb on - strand, within BWI76_RS23410 at 4883.804 kb on + strand at 4883.998 kb on - strand at 4884.048 kb on - strand at 4884.067 kb on + strand at 4884.165 kb on + strand, within BWI76_RS23415 at 4884.165 kb on + strand, within BWI76_RS23415 at 4884.197 kb on - strand at 4884.239 kb on + strand, within BWI76_RS23415 at 4884.260 kb on - strand, within BWI76_RS23415 at 4884.270 kb on + strand, within BWI76_RS23415 at 4884.691 kb on + strand, within BWI76_RS23415 at 4884.812 kb on + strand, within BWI76_RS23415 at 4884.812 kb on + strand, within BWI76_RS23415 at 4884.820 kb on - strand, within BWI76_RS23415 at 4884.847 kb on + strand, within BWI76_RS23415 at 4884.899 kb on - strand, within BWI76_RS23415 at 4884.918 kb on - strand, within BWI76_RS23415 at 4884.964 kb on + strand, within BWI76_RS23415 at 4884.981 kb on + strand, within BWI76_RS23415 at 4884.996 kb on + strand, within BWI76_RS23415 at 4884.996 kb on + strand, within BWI76_RS23415 at 4884.996 kb on + strand, within BWI76_RS23415 at 4885.015 kb on - strand, within BWI76_RS23415 at 4885.058 kb on - strand, within BWI76_RS23415 at 4885.091 kb on - strand at 4885.115 kb on + strand at 4885.360 kb on + strand at 4885.506 kb on - strand at 4885.811 kb on + strand, within BWI76_RS23420 at 4885.853 kb on - strand, within BWI76_RS23420 at 4885.853 kb on - strand, within BWI76_RS23420 at 4885.932 kb on + strand, within BWI76_RS23420 at 4885.942 kb on + strand, within BWI76_RS23420 at 4886.087 kb on + strand, within BWI76_RS23420
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,883,008 - BWI76_RS23410 0.35 +0.3 4,883,109 - BWI76_RS23410 0.42 +0.4 4,883,600 + BWI76_RS23410 0.76 -0.2 4,883,600 + BWI76_RS23410 0.76 -0.3 4,883,608 - BWI76_RS23410 0.77 +0.0 4,883,760 - BWI76_RS23410 0.88 -1.2 4,883,804 + -0.2 4,883,998 - +1.3 4,884,048 - -0.6 4,884,067 + +0.9 4,884,165 + BWI76_RS23415 0.17 -0.9 4,884,165 + BWI76_RS23415 0.17 +0.2 4,884,197 - +1.0 4,884,239 + BWI76_RS23415 0.23 -0.0 4,884,260 - BWI76_RS23415 0.24 -2.0 4,884,270 + BWI76_RS23415 0.25 -0.0 4,884,691 + BWI76_RS23415 0.59 -0.3 4,884,812 + BWI76_RS23415 0.69 +0.1 4,884,812 + BWI76_RS23415 0.69 +0.1 4,884,820 - BWI76_RS23415 0.70 -0.1 4,884,847 + BWI76_RS23415 0.72 -0.2 4,884,899 - BWI76_RS23415 0.76 -1.2 4,884,918 - BWI76_RS23415 0.77 -0.3 4,884,964 + BWI76_RS23415 0.81 -0.6 4,884,981 + BWI76_RS23415 0.83 -0.4 4,884,996 + BWI76_RS23415 0.84 +0.6 4,884,996 + BWI76_RS23415 0.84 -0.7 4,884,996 + BWI76_RS23415 0.84 -0.3 4,885,015 - BWI76_RS23415 0.85 +0.2 4,885,058 - BWI76_RS23415 0.89 +0.1 4,885,091 - -0.1 4,885,115 + +0.5 4,885,360 + +0.8 4,885,506 - -3.4 4,885,811 + BWI76_RS23420 0.37 -3.1 4,885,853 - BWI76_RS23420 0.42 -2.1 4,885,853 - BWI76_RS23420 0.42 -1.8 4,885,932 + BWI76_RS23420 0.50 -0.6 4,885,942 + BWI76_RS23420 0.51 -1.1 4,886,087 + BWI76_RS23420 0.65 -2.2
Or see this region's nucleotide sequence