Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18065 and BWI76_RS18070 are separated by 78 nucleotides BWI76_RS18070 and BWI76_RS18075 are separated by 6 nucleotides BWI76_RS18075 and BWI76_RS18080 are separated by 133 nucleotides BWI76_RS18080 and BWI76_RS18085 are separated by 144 nucleotides
BWI76_RS18065: BWI76_RS18065 - DNA polymerase III subunit theta, at 3,753,460 to 3,753,690
_RS18065
BWI76_RS18070: BWI76_RS18070 - DNA polymerase III subunit epsilon, at 3,753,769 to 3,754,428
_RS18070
BWI76_RS18075: BWI76_RS18075 - oligopeptidase B, at 3,754,435 to 3,756,495
_RS18075
BWI76_RS18080: BWI76_RS18080 - protein YebE, at 3,756,629 to 3,757,309
_RS18080
BWI76_RS18085: BWI76_RS18085 - hypothetical protein, at 3,757,454 to 3,757,816
_RS18085
Position (kb)
3754
3755
3756
3757 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3753.536 kb on + strand, within BWI76_RS18065 at 3753.590 kb on + strand at 3754.286 kb on + strand, within BWI76_RS18070 at 3754.287 kb on - strand, within BWI76_RS18070 at 3754.293 kb on - strand, within BWI76_RS18070 at 3754.385 kb on + strand at 3754.385 kb on + strand at 3754.447 kb on - strand at 3754.661 kb on - strand, within BWI76_RS18075 at 3754.942 kb on - strand, within BWI76_RS18075 at 3755.332 kb on - strand, within BWI76_RS18075 at 3755.332 kb on - strand, within BWI76_RS18075 at 3755.529 kb on + strand, within BWI76_RS18075 at 3755.856 kb on + strand, within BWI76_RS18075 at 3756.276 kb on - strand, within BWI76_RS18075 at 3756.525 kb on - strand at 3756.544 kb on + strand at 3756.562 kb on - strand at 3756.570 kb on - strand at 3756.626 kb on + strand at 3756.824 kb on + strand, within BWI76_RS18080 at 3757.080 kb on + strand, within BWI76_RS18080
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 3,753,536 + BWI76_RS18065 0.33 -0.6 3,753,590 + +2.5 3,754,286 + BWI76_RS18070 0.78 +1.0 3,754,287 - BWI76_RS18070 0.78 -0.1 3,754,293 - BWI76_RS18070 0.79 -0.0 3,754,385 + +0.2 3,754,385 + -0.7 3,754,447 - +0.4 3,754,661 - BWI76_RS18075 0.11 -0.4 3,754,942 - BWI76_RS18075 0.25 -0.5 3,755,332 - BWI76_RS18075 0.44 -0.5 3,755,332 - BWI76_RS18075 0.44 -1.3 3,755,529 + BWI76_RS18075 0.53 -1.8 3,755,856 + BWI76_RS18075 0.69 +0.4 3,756,276 - BWI76_RS18075 0.89 -0.7 3,756,525 - -0.0 3,756,544 + +0.2 3,756,562 - +0.0 3,756,570 - -0.2 3,756,626 + -0.1 3,756,824 + BWI76_RS18080 0.29 -0.5 3,757,080 + BWI76_RS18080 0.66 +0.0
Or see this region's nucleotide sequence