Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16015 and BWI76_RS16020 are separated by 437 nucleotides BWI76_RS16020 and BWI76_RS16025 overlap by 1 nucleotides BWI76_RS16025 and BWI76_RS16030 are separated by 17 nucleotides
BWI76_RS16015: BWI76_RS16015 - pheromone autoinducer 2 transporter, at 3,320,645 to 3,321,679
_RS16015
BWI76_RS16020: BWI76_RS16020 - malonate decarboxylase subunit alpha, at 3,322,117 to 3,323,772
_RS16020
BWI76_RS16025: BWI76_RS16025 - triphosphoribosyl-dephospho-CoA synthase, at 3,323,772 to 3,324,614
_RS16025
BWI76_RS16030: BWI76_RS16030 - malonate decarboxylase acyl carrier protein, at 3,324,632 to 3,324,931
_RS16030
Position (kb)
3322
3323
3324 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3321.150 kb on + strand, within BWI76_RS16015 at 3321.477 kb on + strand, within BWI76_RS16015 at 3321.756 kb on - strand at 3321.872 kb on + strand at 3321.891 kb on - strand at 3322.068 kb on + strand at 3322.445 kb on + strand, within BWI76_RS16020 at 3322.509 kb on - strand, within BWI76_RS16020 at 3322.596 kb on + strand, within BWI76_RS16020 at 3322.604 kb on - strand, within BWI76_RS16020 at 3322.910 kb on + strand, within BWI76_RS16020 at 3322.965 kb on - strand, within BWI76_RS16020 at 3323.076 kb on - strand, within BWI76_RS16020 at 3323.385 kb on - strand, within BWI76_RS16020 at 3323.525 kb on - strand, within BWI76_RS16020 at 3323.737 kb on + strand at 3324.104 kb on - strand, within BWI76_RS16025 at 3324.304 kb on - strand, within BWI76_RS16025 at 3324.729 kb on - strand, within BWI76_RS16030
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 3,321,150 + BWI76_RS16015 0.49 -1.0 3,321,477 + BWI76_RS16015 0.80 +0.4 3,321,756 - -0.4 3,321,872 + +0.7 3,321,891 - -0.9 3,322,068 + +1.1 3,322,445 + BWI76_RS16020 0.20 +0.6 3,322,509 - BWI76_RS16020 0.24 +0.2 3,322,596 + BWI76_RS16020 0.29 -0.1 3,322,604 - BWI76_RS16020 0.29 -0.4 3,322,910 + BWI76_RS16020 0.48 -0.6 3,322,965 - BWI76_RS16020 0.51 +3.3 3,323,076 - BWI76_RS16020 0.58 -1.2 3,323,385 - BWI76_RS16020 0.77 -1.0 3,323,525 - BWI76_RS16020 0.85 +0.3 3,323,737 + +0.3 3,324,104 - BWI76_RS16025 0.39 +0.9 3,324,304 - BWI76_RS16025 0.63 -0.1 3,324,729 - BWI76_RS16030 0.32 -1.3
Or see this region's nucleotide sequence