Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT3285 and BT3286 are separated by 106 nucleotides BT3286 and BT3287 are separated by 35 nucleotides BT3287 and BT3288 are separated by 2 nucleotides
BT3285: BT3285 - Holliday junction DNA helicase ruvB (NCBI ptt file), at 4,202,455 to 4,203,486
BT3285
BT3286: BT3286 - conserved hypothetical protein (NCBI ptt file), at 4,203,593 to 4,204,360
BT3286
BT3287: BT3287 - polysaccharide biosynthesis protein (NCBI ptt file), at 4,204,396 to 4,205,844
BT3287
BT3288: BT3288 - putative integral membrane protein (NCBI ptt file), at 4,205,847 to 4,207,202
BT3288
Position (kb)
4204
4205
4206 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4203.487 kb on + strand at 4203.487 kb on + strand at 4203.607 kb on + strand at 4203.612 kb on + strand at 4203.612 kb on + strand at 4203.618 kb on + strand at 4203.642 kb on + strand at 4203.672 kb on + strand, within BT3286 at 4203.867 kb on + strand, within BT3286 at 4203.997 kb on + strand, within BT3286 at 4204.001 kb on + strand, within BT3286 at 4204.037 kb on + strand, within BT3286 at 4204.039 kb on + strand, within BT3286 at 4204.268 kb on + strand, within BT3286 at 4205.831 kb on + strand at 4205.846 kb on + strand at 4205.898 kb on + strand at 4206.025 kb on + strand, within BT3288 at 4206.026 kb on - strand, within BT3288 at 4206.086 kb on + strand, within BT3288 at 4206.086 kb on + strand, within BT3288 at 4206.213 kb on - strand, within BT3288 at 4206.245 kb on + strand, within BT3288 at 4206.268 kb on + strand, within BT3288 at 4206.462 kb on - strand, within BT3288 at 4206.621 kb on - strand, within BT3288 at 4206.686 kb on - strand, within BT3288 at 4206.837 kb on - strand, within BT3288
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 4,203,487 + -1.0 4,203,487 + -0.3 4,203,607 + -1.6 4,203,612 + -0.8 4,203,612 + +0.5 4,203,618 + +1.5 4,203,642 + +1.0 4,203,672 + BT3286 0.10 -0.0 4,203,867 + BT3286 0.36 -2.0 4,203,997 + BT3286 0.53 -1.0 4,204,001 + BT3286 0.53 -0.8 4,204,037 + BT3286 0.58 -0.0 4,204,039 + BT3286 0.58 -0.5 4,204,268 + BT3286 0.88 -2.0 4,205,831 + -1.3 4,205,846 + -2.9 4,205,898 + -0.0 4,206,025 + BT3288 0.13 -1.0 4,206,026 - BT3288 0.13 +1.1 4,206,086 + BT3288 0.18 -0.3 4,206,086 + BT3288 0.18 -0.8 4,206,213 - BT3288 0.27 -2.1 4,206,245 + BT3288 0.29 -3.2 4,206,268 + BT3288 0.31 -1.0 4,206,462 - BT3288 0.45 +0.2 4,206,621 - BT3288 0.57 -0.0 4,206,686 - BT3288 0.62 +0.3 4,206,837 - BT3288 0.73 -0.8
Or see this region's nucleotide sequence