Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5944

Experiment: nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf1N1B4_5943 and Pf1N1B4_5944 are separated by 7 nucleotidesPf1N1B4_5944 and Pf1N1B4_5945 are separated by 255 nucleotides Pf1N1B4_5943 - hypothetical protein, INTERPRO prediction: regulator of chromosome condensation, at 390,079 to 391,269 _5943 Pf1N1B4_5944 - Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family, at 391,277 to 392,533 _5944 Pf1N1B4_5945 - UDP-glucose dehydrogenase (EC 1.1.1.22), at 392,789 to 394,297 _5945 Position (kb) 391 392 393Strain fitness (log2 ratio) -1 0 1at 392.769 kb on - strandat 392.769 kb on - strandat 392.769 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction nitrate (N)
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392,769 - +1.5
392,769 - -0.7
392,769 - -1.3

Or see this region's nucleotide sequence