Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3837

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,250,668	+		Pf1N1B4_3835	0.81	-2.4
4,250,722	+		Pf1N1B4_3835	0.83	-1.2
4,250,722	+		Pf1N1B4_3835	0.83	-1.8
4,250,722	+		Pf1N1B4_3835	0.83	-1.6
4,250,722	+		Pf1N1B4_3835	0.83	-1.2
4,250,722	+		Pf1N1B4_3835	0.83	-2.2
4,250,722	+				-0.2
4,250,722	+		Pf1N1B4_3835	0.83	-0.9
4,250,723	-		Pf1N1B4_3835	0.83	+1.1
4,250,723	-		Pf1N1B4_3835	0.83	-1.2
4,250,723	-		Pf1N1B4_3835	0.83	-2.8
4,250,723	-		Pf1N1B4_3835	0.83	-1.2
4,250,798	+		Pf1N1B4_3835	0.85	-3.5
4,250,798	+				-0.2
4,250,798	+		Pf1N1B4_3835	0.85	-1.2
4,250,799	-		Pf1N1B4_3835	0.85	-2.2
4,250,799	-		Pf1N1B4_3835	0.85	-2.2
4,250,799	-		Pf1N1B4_3835	0.85	-2.8
4,250,851	+		Pf1N1B4_3835	0.87	-1.6
4,250,851	+		Pf1N1B4_3835	0.87	-1.2
4,250,852	-		Pf1N1B4_3835	0.87	-3.2
4,250,852	-		Pf1N1B4_3835	0.87	-2.2
4,250,852	-		Pf1N1B4_3835	0.87	-0.2
4,250,852	-		Pf1N1B4_3835	0.87	-1.2
4,250,852	-		Pf1N1B4_3835	0.87	-2.2
4,250,852	-		Pf1N1B4_3835	0.87	-0.2
4,250,854	+		Pf1N1B4_3835	0.87	-1.2
4,250,854	+		Pf1N1B4_3835	0.87	-1.2
4,250,854	+		Pf1N1B4_3835	0.87	-2.0
4,250,854	+		Pf1N1B4_3835	0.87	-0.2
4,250,855	-		Pf1N1B4_3835	0.87	-3.2
4,250,855	-		Pf1N1B4_3835	0.87	-1.2
4,250,882	+		Pf1N1B4_3835	0.88	-1.9
4,250,882	+		Pf1N1B4_3835	0.88	-3.2
4,250,882	+		Pf1N1B4_3835	0.88	-1.6
4,250,882	+		Pf1N1B4_3835	0.88	-3.8
4,250,883	-				-1.2
4,250,883	-		Pf1N1B4_3835	0.89	-1.8
4,250,884	+		Pf1N1B4_3835	0.89	-0.6
4,250,884	+				-2.2
4,250,884	+		Pf1N1B4_3835	0.89	-2.4
4,250,884	+		Pf1N1B4_3835	0.89	-2.7
4,250,884	+		Pf1N1B4_3835	0.89	-2.2
4,250,884	+		Pf1N1B4_3835	0.89	-1.4
4,250,884	+		Pf1N1B4_3835	0.89	-3.2
4,250,884	+		Pf1N1B4_3835	0.89	-1.8
4,250,884	+		Pf1N1B4_3835	0.89	-0.2
4,250,884	+		Pf1N1B4_3835	0.89	-0.2
4,250,884	+		Pf1N1B4_3835	0.89	-2.2
4,250,884	+		Pf1N1B4_3835	0.89	-0.2
4,250,884	+		Pf1N1B4_3835	0.89	-0.2
4,250,884	+		Pf1N1B4_3835	0.89	-0.6
4,250,884	+		Pf1N1B4_3835	0.89	-1.5
4,250,884	+		Pf1N1B4_3835	0.89	-2.5
4,250,885	-		Pf1N1B4_3835	0.89	-1.5
4,250,885	-		Pf1N1B4_3835	0.89	+0.8
4,250,885	-		Pf1N1B4_3835	0.89	-2.2
4,250,885	-		Pf1N1B4_3835	0.89	-0.2
4,250,885	-		Pf1N1B4_3835	0.89	-2.2
4,250,885	-		Pf1N1B4_3835	0.89	-2.5
4,250,885	-		Pf1N1B4_3835	0.89	-2.8
4,250,885	-		Pf1N1B4_3835	0.89	-3.2
4,250,885	-		Pf1N1B4_3835	0.89	-1.6
4,250,885	-		Pf1N1B4_3835	0.89	-2.2
4,250,885	-		Pf1N1B4_3835	0.89	-3.4
4,250,885	-				-2.2
4,250,885	-		Pf1N1B4_3835	0.89	-1.2
4,250,885	-		Pf1N1B4_3835	0.89	-1.2
4,251,010	+				-2.4
4,251,059	+				-1.2
4,251,060	-				-1.8
4,251,269	-		Pf1N1B4_3836	0.24	-0.2
4,251,269	-		Pf1N1B4_3836	0.24	-0.2
4,251,342	+		Pf1N1B4_3836	0.47	+0.7
4,251,343	-		Pf1N1B4_3836	0.47	-0.2
4,251,702	-				-1.2
4,251,722	+				-0.2
4,251,722	+				-1.2
4,251,723	-				-1.2
4,251,723	-				-1.2
4,251,723	-				+0.4
4,251,764	+				-1.2
4,251,765	-		Pf1N1B4_3837	0.10	+0.4
4,251,845	+		Pf1N1B4_3837	0.14	-1.2
4,251,845	+		Pf1N1B4_3837	0.14	-2.8
4,251,845	+		Pf1N1B4_3837	0.14	-0.2
4,251,845	+		Pf1N1B4_3837	0.14	-0.2
4,251,845	+		Pf1N1B4_3837	0.14	-1.6
4,251,845	+		Pf1N1B4_3837	0.14	+0.6
4,251,846	-		Pf1N1B4_3837	0.14	-1.2
4,251,846	-		Pf1N1B4_3837	0.14	-1.2
4,251,846	-				-0.6
4,251,846	-		Pf1N1B4_3837	0.14	-1.8
4,251,846	-		Pf1N1B4_3837	0.14	-1.2
4,251,846	-		Pf1N1B4_3837	0.14	-0.2
4,251,846	-		Pf1N1B4_3837	0.14	-1.8
4,251,874	-		Pf1N1B4_3837	0.15	+0.3
4,252,181	+		Pf1N1B4_3837	0.27	-2.8
4,252,181	+		Pf1N1B4_3837	0.27	-1.2
4,252,181	+		Pf1N1B4_3837	0.27	-2.8
4,252,182	-		Pf1N1B4_3837	0.27	-1.5
4,252,182	-		Pf1N1B4_3837	0.27	-1.2
4,252,252	+		Pf1N1B4_3837	0.30	-1.2
4,252,259	+		Pf1N1B4_3837	0.31	-2.8
4,252,259	+		Pf1N1B4_3837	0.31	-2.2
4,252,259	+		Pf1N1B4_3837	0.31	-1.2
4,252,259	+		Pf1N1B4_3837	0.31	-1.2
4,252,259	+				-1.2
4,252,259	+		Pf1N1B4_3837	0.31	-2.2
4,252,259	+		Pf1N1B4_3837	0.31	-2.8
4,252,259	+		Pf1N1B4_3837	0.31	+0.4
4,252,260	-		Pf1N1B4_3837	0.31	-3.5
4,252,260	-		Pf1N1B4_3837	0.31	-0.8
4,252,260	-		Pf1N1B4_3837	0.31	-2.8
4,252,260	-		Pf1N1B4_3837	0.31	-2.2
4,252,260	-		Pf1N1B4_3837	0.31	-1.5
4,252,260	-		Pf1N1B4_3837	0.31	-1.8
4,252,356	-		Pf1N1B4_3837	0.35	-2.2
4,252,358	+		Pf1N1B4_3837	0.35	+0.2
4,252,358	+		Pf1N1B4_3837	0.35	-2.7
4,252,358	+		Pf1N1B4_3837	0.35	-1.2
4,252,358	+		Pf1N1B4_3837	0.35	-2.2
4,252,358	+		Pf1N1B4_3837	0.35	-2.8
4,252,359	-		Pf1N1B4_3837	0.35	-1.2
4,252,359	-		Pf1N1B4_3837	0.35	-1.2
4,252,413	-		Pf1N1B4_3837	0.37	-1.2
4,252,419	+		Pf1N1B4_3837	0.37	+0.8
4,252,420	-		Pf1N1B4_3837	0.37	+0.4
4,252,744	+		Pf1N1B4_3837	0.50	-1.2
4,252,744	+		Pf1N1B4_3837	0.50	-2.2
4,252,744	+		Pf1N1B4_3837	0.50	-1.2
4,252,744	+		Pf1N1B4_3837	0.50	-1.8
4,252,745	-		Pf1N1B4_3837	0.50	-2.2
4,252,745	-		Pf1N1B4_3837	0.50	-0.2
4,252,826	+		Pf1N1B4_3837	0.54	-2.8
4,252,826	+		Pf1N1B4_3837	0.54	-2.2
4,252,826	+		Pf1N1B4_3837	0.54	-2.8
4,252,826	+		Pf1N1B4_3837	0.54	-1.2
4,252,826	+		Pf1N1B4_3837	0.54	-2.2
4,252,826	+		Pf1N1B4_3837	0.54	-0.2
4,252,902	-				-1.2
4,253,024	+		Pf1N1B4_3837	0.62	-2.8
4,253,024	+		Pf1N1B4_3837	0.62	-2.8
4,253,024	+		Pf1N1B4_3837	0.62	-1.8
4,253,024	+		Pf1N1B4_3837	0.62	-1.6
4,253,024	+		Pf1N1B4_3837	0.62	-0.2
4,253,025	-		Pf1N1B4_3837	0.62	-2.8
4,253,025	-		Pf1N1B4_3837	0.62	-0.8
4,253,138	+		Pf1N1B4_3837	0.66	-3.2
4,253,138	+		Pf1N1B4_3837	0.66	-0.5
4,253,139	-		Pf1N1B4_3837	0.66	-3.2
4,253,139	-		Pf1N1B4_3837	0.66	-1.2
4,253,153	+		Pf1N1B4_3837	0.67	-2.5
4,253,154	-		Pf1N1B4_3837	0.67	-1.8
4,253,154	-		Pf1N1B4_3837	0.67	-1.2
4,253,154	-		Pf1N1B4_3837	0.67	-0.2
4,253,324	-		Pf1N1B4_3837	0.74	-2.2
4,253,599	-		Pf1N1B4_3837	0.85	-1.2
4,253,657	+		Pf1N1B4_3837	0.88	-1.2
4,253,658	-		Pf1N1B4_3837	0.88	-3.0
4,253,713	+		Pf1N1B4_3837	0.90	-2.2
4,253,713	+		Pf1N1B4_3837	0.90	-2.6
4,253,714	-		Pf1N1B4_3837	0.90	-0.2
4,253,716	+				+0.4
4,253,716	+				-2.2
4,253,716	+				-0.2
4,253,716	+				-2.2
4,253,716	+				-1.2
4,253,717	-				-2.2
4,253,717	-				-1.2
4,253,717	-				-2.2
4,253,834	+				-2.2
4,253,834	+				-3.5
4,253,834	+				-1.2
4,253,834	+				-1.2
4,253,834	+				-4.2
4,253,834	+				-2.8
4,253,834	+				-1.2
4,253,835	-				-2.8
4,253,835	-				-1.2
4,253,835	-				+1.1
4,253,841	+				-2.2
4,253,874	-				-2.4
4,253,884	-				-3.2
4,253,944	+				-1.2
4,253,944	+				+0.8
4,253,945	-				-1.2
4,253,945	-				-1.8
4,254,055	+				-2.2
4,254,055	+				-2.8
4,254,055	+				-1.2
4,254,055	+				-1.2
4,254,056	-				-1.6
4,254,056	-				-0.8
4,254,056	-				-0.2
4,254,059	+				-1.2
4,254,059	+				-1.2
4,254,060	-				-2.2
4,254,060	-				+1.3
4,254,110	+				-2.2
4,254,110	+				-1.2
4,254,110	+				-2.2
4,254,110	+				-2.5
4,254,110	+				-1.2
4,254,111	-				-2.2
4,254,111	-				+0.8
4,254,129	+				-2.8
4,254,129	+				-1.2
4,254,129	+				-2.8
4,254,129	+				-0.2
4,254,130	-				-1.6
4,254,130	-				-0.1
4,254,130	-				-0.2
4,254,130	-				-2.8
4,254,130	-				+0.4
4,254,130	-				-1.2
4,254,130	-				-3.5
4,254,133	+				-2.2
4,254,133	+				-2.2
4,254,134	-				+2.0
4,254,134	-				+0.8
4,254,134	-				-1.2
4,254,134	-				+1.1
4,254,134	-				-0.2
4,254,134	-				+0.8
4,254,134	-				-1.2
4,254,134	-				+0.8
4,254,293	+				-1.2
4,254,294	-				-0.2
4,254,294	-				+0.0
4,254,491	-				+1.4
4,254,675	-		Pf1N1B4_3838	0.20	-0.3
4,254,677	+		Pf1N1B4_3838	0.20	+1.9
4,254,677	+		Pf1N1B4_3838	0.20	+1.2
4,254,677	+		Pf1N1B4_3838	0.20	+0.9
4,254,677	+		Pf1N1B4_3838	0.20	+0.8
4,254,677	+		Pf1N1B4_3838	0.20	+1.8
4,254,678	-		Pf1N1B4_3838	0.20	+1.8
4,254,678	-		Pf1N1B4_3838	0.20	+0.3
4,254,678	-		Pf1N1B4_3838	0.20	+0.8
4,254,698	+		Pf1N1B4_3838	0.21	-0.6
4,254,699	-				-2.2
4,254,717	+		Pf1N1B4_3838	0.22	+1.1
4,254,717	+		Pf1N1B4_3838	0.22	-1.8
4,254,717	+		Pf1N1B4_3838	0.22	-0.5
4,254,717	+		Pf1N1B4_3838	0.22	+0.7
4,254,718	-		Pf1N1B4_3838	0.22	+0.1
4,254,718	-		Pf1N1B4_3838	0.22	-1.2
4,254,718	-		Pf1N1B4_3838	0.22	+0.4
4,254,752	+		Pf1N1B4_3838	0.24	-1.2
4,254,752	+		Pf1N1B4_3838	0.24	+0.1
4,254,752	+		Pf1N1B4_3838	0.24	+1.0
4,254,752	+				-0.2
4,254,752	+		Pf1N1B4_3838	0.24	+0.5
4,254,752	+		Pf1N1B4_3838	0.24	-0.6
4,254,752	+		Pf1N1B4_3838	0.24	+2.9
4,254,752	+		Pf1N1B4_3838	0.24	-0.1
4,254,753	-		Pf1N1B4_3838	0.24	+0.8
4,254,753	-		Pf1N1B4_3838	0.24	-1.2
4,254,753	-		Pf1N1B4_3838	0.24	+0.6
4,254,753	-		Pf1N1B4_3838	0.24	+0.8
4,254,753	-		Pf1N1B4_3838	0.24	+1.8
4,254,753	-		Pf1N1B4_3838	0.24	-1.2