Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3139

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
3,521,637	+		Pf1N1B4_3137	0.55	-0.9
3,521,716	+		Pf1N1B4_3137	0.64	-0.3
3,521,716	+		Pf1N1B4_3137	0.64	-1.9
3,521,717	-		Pf1N1B4_3137	0.64	+0.6
3,521,717	-		Pf1N1B4_3137	0.64	+1.0
3,521,740	+		Pf1N1B4_3137	0.67	+0.3
3,521,740	+		Pf1N1B4_3137	0.67	+1.3
3,521,741	-		Pf1N1B4_3137	0.67	+2.9
3,521,741	-		Pf1N1B4_3137	0.67	+0.3
3,521,741	-		Pf1N1B4_3137	0.67	+0.7
3,521,741	-		Pf1N1B4_3137	0.67	-0.3
3,521,741	-		Pf1N1B4_3137	0.67	-0.5
3,521,741	-		Pf1N1B4_3137	0.67	-2.5
3,521,741	-		Pf1N1B4_3137	0.67	-0.9
3,521,788	+		Pf1N1B4_3137	0.72	-0.9
3,521,789	-		Pf1N1B4_3137	0.72	+1.4
3,521,848	+		Pf1N1B4_3137	0.79	+1.7
3,521,848	+		Pf1N1B4_3137	0.79	-1.9
3,521,848	+		Pf1N1B4_3137	0.79	+0.7
3,521,848	+		Pf1N1B4_3137	0.79	-0.6
3,521,848	+		Pf1N1B4_3137	0.79	-0.2
3,521,848	+				-0.9
3,521,848	+		Pf1N1B4_3137	0.79	+0.9
3,521,848	+		Pf1N1B4_3137	0.79	+1.1
3,521,848	+		Pf1N1B4_3137	0.79	+1.0
3,521,848	+		Pf1N1B4_3137	0.79	+0.1
3,521,848	+		Pf1N1B4_3137	0.79	+0.1
3,521,848	+		Pf1N1B4_3137	0.79	+0.7
3,521,848	+		Pf1N1B4_3137	0.79	+0.2
3,521,849	+		Pf1N1B4_3137	0.79	+1.4
3,521,849	-		Pf1N1B4_3137	0.79	-2.5
3,521,849	-		Pf1N1B4_3137	0.79	-0.9
3,521,849	-		Pf1N1B4_3137	0.79	-0.9
3,521,849	-		Pf1N1B4_3137	0.79	+0.4
3,521,849	-		Pf1N1B4_3137	0.79	-0.3
3,521,849	-		Pf1N1B4_3137	0.79	-1.9
3,521,849	-				-0.9
3,521,849	-		Pf1N1B4_3137	0.79	-0.2
3,521,849	-		Pf1N1B4_3137	0.79	+0.9
3,521,849	-		Pf1N1B4_3137	0.79	+0.4
3,521,849	-		Pf1N1B4_3137	0.79	+0.1
3,521,850	+				+0.7
3,521,851	-		Pf1N1B4_3137	0.79	+1.4
3,521,851	-		Pf1N1B4_3137	0.79	+0.1
3,521,851	-		Pf1N1B4_3137	0.79	+0.1
3,521,851	-		Pf1N1B4_3137	0.79	-0.9
3,522,019	+				+0.1
3,522,072	+				-1.5
3,522,073	-				-2.5
3,522,085	+				-0.1
3,522,085	+				+0.1
3,522,085	+				-0.9
3,522,085	+				-0.6
3,522,085	+				-1.7
3,522,086	-				-1.3
3,522,128	+				-1.2
3,522,128	+				-0.9
3,522,128	+				-2.5
3,522,128	+				-2.5
3,522,128	+				+1.1
3,522,129	-				-1.9
3,522,310	-				-0.1
3,522,310	-				+0.8
3,522,373	+		Pf1N1B4_3138	0.36	-0.3
3,522,374	-		Pf1N1B4_3138	0.36	+1.5
3,522,479	-				+1.5
3,522,498	+				-0.3
3,522,499	-				+1.4
3,522,513	+				-0.5
3,522,513	+				-1.5
3,522,513	+				+0.1
3,522,513	+				-1.9
3,522,513	+				+0.4
3,522,513	+				+0.2
3,522,513	+				-0.2
3,522,514	-				+0.7
3,522,514	-				+0.7
3,522,514	-				+0.7
3,522,514	-				+0.9
3,522,514	-				+1.3
3,522,514	-				+0.7
3,522,574	-				+1.4
3,522,576	+				-1.5
3,522,576	+				+1.1
3,522,576	+				-0.3
3,522,577	-				+2.4
3,522,600	-				+0.1
3,522,710	-				+0.1
3,522,733	+		Pf1N1B4_3139	0.12	-0.9
3,522,747	+		Pf1N1B4_3139	0.13	-0.9
3,522,844	+		Pf1N1B4_3139	0.21	-0.2
3,522,845	-		Pf1N1B4_3139	0.21	-2.2
3,522,845	-		Pf1N1B4_3139	0.21	+1.4
3,522,845	-				-0.9
3,522,907	+		Pf1N1B4_3139	0.26	-0.9
3,522,921	-		Pf1N1B4_3139	0.27	+1.4
3,522,970	+				+0.1
3,522,971	-		Pf1N1B4_3139	0.31	+1.0
3,522,991	-		Pf1N1B4_3139	0.33	-0.2
3,523,025	+		Pf1N1B4_3139	0.36	+0.4
3,523,067	-		Pf1N1B4_3139	0.39	-0.9
3,523,067	-		Pf1N1B4_3139	0.39	-0.2
3,523,069	+		Pf1N1B4_3139	0.39	+1.9
3,523,069	+		Pf1N1B4_3139	0.39	+0.9
3,523,070	-		Pf1N1B4_3139	0.39	+1.7
3,523,173	+		Pf1N1B4_3139	0.48	+1.1
3,523,173	+		Pf1N1B4_3139	0.48	+0.7
3,523,174	-		Pf1N1B4_3139	0.48	-0.5
3,523,174	-		Pf1N1B4_3139	0.48	+0.1
3,523,174	-		Pf1N1B4_3139	0.48	-0.2
3,523,187	+		Pf1N1B4_3139	0.49	+0.9
3,523,187	+		Pf1N1B4_3139	0.49	-0.2
3,523,262	+		Pf1N1B4_3139	0.55	+1.1
3,523,262	+		Pf1N1B4_3139	0.55	+0.7
3,523,262	+		Pf1N1B4_3139	0.55	+1.7
3,523,262	+		Pf1N1B4_3139	0.55	+1.7
3,523,263	-		Pf1N1B4_3139	0.55	-0.5
3,523,309	+		Pf1N1B4_3139	0.59	+1.1
3,523,326	-		Pf1N1B4_3139	0.61	-1.3
3,523,466	+		Pf1N1B4_3139	0.72	+1.1
3,523,480	+		Pf1N1B4_3139	0.73	+0.7
3,523,480	+		Pf1N1B4_3139	0.73	+0.7
3,523,481	-		Pf1N1B4_3139	0.73	-0.9
3,523,507	+		Pf1N1B4_3139	0.76	-0.3
3,523,519	+		Pf1N1B4_3139	0.77	+1.9
3,523,519	+				+1.4
3,523,519	+		Pf1N1B4_3139	0.77	+1.7
3,523,519	+		Pf1N1B4_3139	0.77	-0.9
3,523,519	+		Pf1N1B4_3139	0.77	-1.3
3,523,519	+		Pf1N1B4_3139	0.77	-0.3
3,523,537	+		Pf1N1B4_3139	0.78	+1.1
3,523,537	+		Pf1N1B4_3139	0.78	+0.7
3,523,537	+		Pf1N1B4_3139	0.78	+0.9
3,523,593	+		Pf1N1B4_3139	0.83	+1.4
3,523,797	+				+0.1
3,523,797	+				+0.5
3,523,797	+				+1.4
3,523,797	+				+0.5
3,523,797	+				+1.4
3,523,797	+				-0.3
3,523,797	+				+0.7
3,523,797	+				+0.9
3,523,797	+				+1.4
3,523,797	+				+1.7
3,523,797	+				+0.7
3,523,797	+				+0.1
3,523,797	+				-1.5
3,523,797	+				+0.7
3,523,798	-				+1.1
3,523,799	+				+1.1
3,523,799	+				+1.7
3,523,800	-				-0.9
3,523,820	+				+1.4
3,523,820	+				-0.9
3,523,827	+				+0.5
3,523,842	+				+0.7
3,523,842	+				+1.3
3,523,842	+				+1.9
3,523,843	-				+2.1
3,523,867	+				-0.3
3,523,905	-				-1.2
3,524,005	+				+1.5
3,524,021	+				+0.1
3,524,021	+				+0.8
3,524,021	+				-0.9
3,524,021	+				+0.4
3,524,021	+				+2.4
3,524,021	+				-0.9
3,524,021	+				+2.4
3,524,021	+				-0.9
3,524,022	-				-1.9
3,524,022	-				+0.3
3,524,022	-				+1.0
3,524,022	-				+1.1
3,524,044	+				-0.3
3,524,044	+				+1.2
3,524,044	+				+0.7
3,524,044	+				+0.1
3,524,044	+				+0.7
3,524,044	+				+1.3
3,524,045	-				+0.9
3,524,185	+		Pf1N1B4_3140	0.24	+0.1
3,524,185	+		Pf1N1B4_3140	0.24	+0.4
3,524,185	+		Pf1N1B4_3140	0.24	+1.9
3,524,185	+		Pf1N1B4_3140	0.24	+1.9
3,524,185	+		Pf1N1B4_3140	0.24	+0.4
3,524,185	+		Pf1N1B4_3140	0.24	-0.9
3,524,185	+		Pf1N1B4_3140	0.24	-0.9
3,524,186	-		Pf1N1B4_3140	0.25	+1.7
3,524,186	-		Pf1N1B4_3140	0.25	+1.1
3,524,186	-		Pf1N1B4_3140	0.25	-1.2
3,524,186	-		Pf1N1B4_3140	0.25	-0.3
3,524,186	-		Pf1N1B4_3140	0.25	+0.1
3,524,186	-		Pf1N1B4_3140	0.25	+0.4
3,524,186	-		Pf1N1B4_3140	0.25	-1.1
3,524,186	-		Pf1N1B4_3140	0.25	-2.5
3,524,190	+		Pf1N1B4_3140	0.25	-2.9
3,524,190	+		Pf1N1B4_3140	0.25	-2.9
3,524,190	+		Pf1N1B4_3140	0.25	-0.9
3,524,190	+		Pf1N1B4_3140	0.25	+0.3
3,524,190	+		Pf1N1B4_3140	0.25	+0.1
3,524,191	-				-0.9
3,524,191	-		Pf1N1B4_3140	0.26	+1.1
3,524,191	-		Pf1N1B4_3140	0.26	+1.3
3,524,191	-		Pf1N1B4_3140	0.26	-0.3
3,524,194	+		Pf1N1B4_3140	0.26	+0.2
3,524,194	+		Pf1N1B4_3140	0.26	-1.5
3,524,194	+		Pf1N1B4_3140	0.26	-0.1
3,524,194	+		Pf1N1B4_3140	0.26	+1.4
3,524,194	+		Pf1N1B4_3140	0.26	+0.4
3,524,194	+		Pf1N1B4_3140	0.26	-0.9
3,524,194	+		Pf1N1B4_3140	0.26	+0.3
3,524,194	+		Pf1N1B4_3140	0.26	-0.3
3,524,194	+		Pf1N1B4_3140	0.26	+1.3
3,524,195	-		Pf1N1B4_3140	0.26	+1.3
3,524,195	-		Pf1N1B4_3140	0.26	+0.7
3,524,195	-		Pf1N1B4_3140	0.26	+1.5
3,524,195	-		Pf1N1B4_3140	0.26	-2.9
3,524,195	-		Pf1N1B4_3140	0.26	-0.9
3,524,195	-		Pf1N1B4_3140	0.26	+0.1
3,524,195	-		Pf1N1B4_3140	0.26	-1.5
3,524,195	-		Pf1N1B4_3140	0.26	+1.1
3,524,195	-		Pf1N1B4_3140	0.26	+0.7
3,524,218	-		Pf1N1B4_3140	0.31	+0.7
3,524,229	+		Pf1N1B4_3140	0.33	+1.1
3,524,229	+		Pf1N1B4_3140	0.33	-0.5
3,524,229	+				+0.1
3,524,230	-		Pf1N1B4_3140	0.33	-1.9
3,524,230	-		Pf1N1B4_3140	0.33	+0.1
3,524,295	+		Pf1N1B4_3140	0.45	+0.4
3,524,296	-		Pf1N1B4_3140	0.45	-0.2
3,524,566	+				+0.1
3,524,566	+				+0.9
3,524,567	-				+0.4
3,524,711	-		Pf1N1B4_3141	0.28	+1.5