Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3522 and Dsui_3523 are separated by 77 nucleotides Dsui_3523 and Dsui_3524 overlap by 17 nucleotides Dsui_3524 and Dsui_3525 are separated by 1 nucleotides Dsui_3525 and Dsui_3526 are separated by 12 nucleotides
Dsui_3522: Dsui_3522 - outer membrane protein, at 3,788,584 to 3,789,840
_3522
Dsui_3523: Dsui_3523 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,789,918 to 3,790,628
_3523
Dsui_3524: Dsui_3524 - signal transduction histidine kinase, at 3,790,612 to 3,792,000
_3524
Dsui_3525: Dsui_3525 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 3,792,002 to 3,792,766
_3525
Dsui_3526: Dsui_3526 - phosphatidylserine decarboxylase, at 3,792,779 to 3,793,423
_3526
Position (kb)
3790
3791
3792
3793 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3789.694 kb on + strand, within Dsui_3522 at 3789.743 kb on + strand at 3789.745 kb on - strand at 3789.745 kb on - strand at 3789.747 kb on + strand at 3789.751 kb on - strand at 3789.753 kb on + strand at 3789.818 kb on - strand at 3789.820 kb on + strand at 3789.914 kb on - strand at 3789.973 kb on - strand at 3790.048 kb on + strand, within Dsui_3523 at 3790.071 kb on - strand, within Dsui_3523 at 3790.071 kb on - strand, within Dsui_3523 at 3790.120 kb on + strand, within Dsui_3523 at 3790.138 kb on - strand, within Dsui_3523 at 3790.163 kb on - strand at 3790.165 kb on + strand, within Dsui_3523 at 3790.198 kb on - strand, within Dsui_3523 at 3790.357 kb on + strand, within Dsui_3523 at 3790.426 kb on + strand, within Dsui_3523 at 3790.443 kb on - strand, within Dsui_3523 at 3790.482 kb on - strand at 3790.483 kb on - strand, within Dsui_3523 at 3790.518 kb on - strand, within Dsui_3523 at 3790.602 kb on - strand at 3790.622 kb on + strand at 3790.635 kb on - strand at 3790.671 kb on + strand at 3790.757 kb on - strand at 3790.760 kb on + strand, within Dsui_3524 at 3790.768 kb on - strand, within Dsui_3524 at 3790.772 kb on - strand, within Dsui_3524 at 3791.137 kb on - strand, within Dsui_3524 at 3791.231 kb on + strand, within Dsui_3524 at 3791.239 kb on - strand, within Dsui_3524 at 3791.386 kb on + strand, within Dsui_3524 at 3791.506 kb on + strand, within Dsui_3524 at 3791.506 kb on + strand, within Dsui_3524 at 3791.511 kb on + strand, within Dsui_3524 at 3791.511 kb on + strand, within Dsui_3524 at 3791.514 kb on - strand, within Dsui_3524 at 3791.740 kb on - strand, within Dsui_3524 at 3791.878 kb on - strand at 3791.884 kb on - strand at 3791.892 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 3,789,694 + Dsui_3522 0.88 -0.9 3,789,743 + +0.7 3,789,745 - -1.6 3,789,745 - -1.0 3,789,747 + +0.7 3,789,751 - -0.8 3,789,753 + +0.7 3,789,818 - -2.3 3,789,820 + +0.7 3,789,914 - -0.3 3,789,973 - -1.3 3,790,048 + Dsui_3523 0.18 -3.8 3,790,071 - Dsui_3523 0.22 -1.3 3,790,071 - Dsui_3523 0.22 -0.3 3,790,120 + Dsui_3523 0.28 -4.4 3,790,138 - Dsui_3523 0.31 -1.3 3,790,163 - -0.9 3,790,165 + Dsui_3523 0.35 -4.1 3,790,198 - Dsui_3523 0.39 -0.3 3,790,357 + Dsui_3523 0.62 -4.4 3,790,426 + Dsui_3523 0.71 -4.4 3,790,443 - Dsui_3523 0.74 -0.3 3,790,482 - -1.3 3,790,483 - Dsui_3523 0.79 -2.7 3,790,518 - Dsui_3523 0.84 -3.3 3,790,602 - -2.3 3,790,622 + -2.7 3,790,635 - -1.6 3,790,671 + -3.4 3,790,757 - -0.9 3,790,760 + Dsui_3524 0.11 -4.4 3,790,768 - Dsui_3524 0.11 +0.7 3,790,772 - Dsui_3524 0.12 -2.7 3,791,137 - Dsui_3524 0.38 -1.6 3,791,231 + Dsui_3524 0.45 -4.5 3,791,239 - Dsui_3524 0.45 -2.3 3,791,386 + Dsui_3524 0.56 -4.3 3,791,506 + Dsui_3524 0.64 -3.4 3,791,506 + Dsui_3524 0.64 -3.6 3,791,511 + Dsui_3524 0.65 -2.4 3,791,511 + Dsui_3524 0.65 -4.2 3,791,514 - Dsui_3524 0.65 -2.6 3,791,740 - Dsui_3524 0.81 -2.7 3,791,878 - -2.4 3,791,884 - -3.7 3,791,892 + -4.6
Or see this region's nucleotide sequence