Strain Fitness in Dechlorosoma suillum PS around Dsui_2819

Experiment: ALP with Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2817 and Dsui_2818 overlap by 1 nucleotidesDsui_2818 and Dsui_2819 overlap by 31 nucleotidesDsui_2819 and Dsui_2820 are separated by 1 nucleotidesDsui_2820 and Dsui_2821 are separated by 67 nucleotides Dsui_2817: Dsui_2817 - DMT(drug/metabolite transporter) superfamily permease, at 2,993,904 to 2,994,830 _2817 Dsui_2818: Dsui_2818 - hypothetical protein, at 2,994,830 to 2,995,630 _2818 Dsui_2819: Dsui_2819 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,995,600 to 2,996,373 _2819 Dsui_2820: Dsui_2820 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,996,375 to 2,997,280 _2820 Dsui_2821: Dsui_2821 - K+ transport system, NAD-binding component, at 2,997,348 to 2,998,385 _2821 Position (kb) 2995 2996 2997Strain fitness (log2 ratio) -1 0 1 2at 2994.740 kb on + strandat 2994.784 kb on + strandat 2994.789 kb on + strandat 2994.859 kb on + strandat 2994.870 kb on + strandat 2995.031 kb on + strand, within Dsui_2818at 2995.039 kb on - strand, within Dsui_2818at 2995.145 kb on + strand, within Dsui_2818at 2995.164 kb on - strand, within Dsui_2818at 2995.290 kb on + strandat 2995.297 kb on - strand, within Dsui_2818at 2995.310 kb on + strand, within Dsui_2818at 2995.464 kb on - strand, within Dsui_2818at 2995.519 kb on + strand, within Dsui_2818at 2995.527 kb on - strand, within Dsui_2818at 2995.562 kb on - strandat 2995.694 kb on + strand, within Dsui_2819at 2995.821 kb on - strand, within Dsui_2819at 2995.958 kb on - strand, within Dsui_2819at 2995.984 kb on + strand, within Dsui_2819at 2996.125 kb on + strandat 2996.232 kb on + strand, within Dsui_2819at 2996.272 kb on + strand, within Dsui_2819at 2996.272 kb on + strandat 2996.272 kb on + strand, within Dsui_2819at 2996.321 kb on + strandat 2996.364 kb on - strandat 2996.436 kb on - strandat 2996.476 kb on - strand, within Dsui_2820at 2996.664 kb on - strand, within Dsui_2820at 2996.676 kb on + strandat 2996.769 kb on - strand, within Dsui_2820at 2996.851 kb on + strandat 2996.928 kb on - strand, within Dsui_2820at 2997.033 kb on + strandat 2997.120 kb on - strand, within Dsui_2820at 2997.139 kb on + strandat 2997.195 kb on - strandat 2997.195 kb on - strandat 2997.205 kb on - strandat 2997.262 kb on + strandat 2997.297 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml
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2,994,740 + +1.9
2,994,784 + -0.1
2,994,789 + +1.9
2,994,859 + +0.9
2,994,870 + -0.1
2,995,031 + Dsui_2818 0.25 -0.1
2,995,039 - Dsui_2818 0.26 +0.9
2,995,145 + Dsui_2818 0.39 -0.1
2,995,164 - Dsui_2818 0.42 -0.1
2,995,290 + +0.9
2,995,297 - Dsui_2818 0.58 +0.9
2,995,310 + Dsui_2818 0.60 -1.4
2,995,464 - Dsui_2818 0.79 +0.9
2,995,519 + Dsui_2818 0.86 +0.9
2,995,527 - Dsui_2818 0.87 -1.4
2,995,562 - -0.1
2,995,694 + Dsui_2819 0.12 -0.7
2,995,821 - Dsui_2819 0.29 +0.3
2,995,958 - Dsui_2819 0.46 -1.1
2,995,984 + Dsui_2819 0.50 -1.1
2,996,125 + +0.9
2,996,232 + Dsui_2819 0.82 -1.1
2,996,272 + Dsui_2819 0.87 +0.9
2,996,272 + +0.9
2,996,272 + Dsui_2819 0.87 -0.7
2,996,321 + +0.9
2,996,364 - -0.1
2,996,436 - -0.7
2,996,476 - Dsui_2820 0.11 -0.1
2,996,664 - Dsui_2820 0.32 -1.1
2,996,676 + +0.9
2,996,769 - Dsui_2820 0.43 -0.1
2,996,851 + -0.7
2,996,928 - Dsui_2820 0.61 -1.4
2,997,033 + +0.9
2,997,120 - Dsui_2820 0.82 +0.9
2,997,139 + -0.1
2,997,195 - -0.1
2,997,195 - -0.7
2,997,205 - -0.1
2,997,262 + +0.9
2,997,297 - -0.7

Or see this region's nucleotide sequence