Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2779 and Dsui_2780 are separated by 13 nucleotides Dsui_2780 and Dsui_2781 are separated by 14 nucleotides Dsui_2781 and Dsui_2782 overlap by 4 nucleotides
Dsui_2779: Dsui_2779 - PAS domain S-box, at 2,941,708 to 2,944,797
_2779
Dsui_2780: Dsui_2780 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,944,811 to 2,945,245
_2780
Dsui_2781: Dsui_2781 - PAS domain S-box, at 2,945,260 to 2,949,126
_2781
Dsui_2782: Dsui_2782 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 2,949,123 to 2,950,247
_2782
Position (kb)
2945
2946
2947
2948
2949
2950 Strain fitness (log2 ratio)
-1
0
1 at 2944.509 kb on - strand at 2944.515 kb on + strand at 2944.756 kb on - strand at 2944.783 kb on + strand at 2944.791 kb on - strand at 2944.801 kb on - strand at 2945.170 kb on - strand at 2945.170 kb on - strand, within Dsui_2780 at 2945.212 kb on - strand at 2945.462 kb on + strand at 2945.924 kb on - strand at 2945.968 kb on + strand at 2946.109 kb on + strand at 2946.319 kb on + strand at 2946.686 kb on + strand, within Dsui_2781 at 2946.686 kb on + strand, within Dsui_2781 at 2946.688 kb on - strand, within Dsui_2781 at 2947.016 kb on - strand at 2947.410 kb on - strand, within Dsui_2781 at 2947.509 kb on - strand, within Dsui_2781 at 2947.681 kb on - strand, within Dsui_2781 at 2947.681 kb on - strand, within Dsui_2781 at 2947.700 kb on + strand, within Dsui_2781 at 2947.700 kb on + strand, within Dsui_2781 at 2947.702 kb on - strand, within Dsui_2781 at 2948.789 kb on + strand at 2948.903 kb on + strand at 2949.114 kb on - strand at 2949.342 kb on - strand at 2949.696 kb on + strand, within Dsui_2782 at 2949.721 kb on + strand, within Dsui_2782 at 2949.778 kb on - strand, within Dsui_2782
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 2,944,509 - +0.9 2,944,515 + -0.1 2,944,756 - -0.1 2,944,783 + +0.9 2,944,791 - -0.1 2,944,801 - +0.9 2,945,170 - +0.9 2,945,170 - Dsui_2780 0.83 -0.7 2,945,212 - -1.4 2,945,462 + -0.1 2,945,924 - -0.1 2,945,968 + -0.1 2,946,109 + +0.9 2,946,319 + -0.1 2,946,686 + Dsui_2781 0.37 -0.1 2,946,686 + Dsui_2781 0.37 -0.7 2,946,688 - Dsui_2781 0.37 +0.4 2,947,016 - +0.9 2,947,410 - Dsui_2781 0.56 -0.1 2,947,509 - Dsui_2781 0.58 -1.1 2,947,681 - Dsui_2781 0.63 +0.9 2,947,681 - Dsui_2781 0.63 -1.1 2,947,700 + Dsui_2781 0.63 +0.9 2,947,700 + Dsui_2781 0.63 -1.1 2,947,702 - Dsui_2781 0.63 -0.7 2,948,789 + -1.4 2,948,903 + -1.4 2,949,114 - +0.9 2,949,342 - -0.1 2,949,696 + Dsui_2782 0.51 +0.9 2,949,721 + Dsui_2782 0.53 -0.1 2,949,778 - Dsui_2782 0.58 -0.7
Or see this region's nucleotide sequence