Strain Fitness in Dechlorosoma suillum PS around Dsui_2598

Experiment: ALP with Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2597 and Dsui_2598 are separated by 79 nucleotidesDsui_2598 and Dsui_2599 are separated by 729 nucleotides Dsui_2597: Dsui_2597 - tyrosine recombinase XerD, at 2,752,441 to 2,753,355 _2597 Dsui_2598: Dsui_2598 - hypothetical protein, at 2,753,435 to 2,754,256 _2598 Dsui_2599: Dsui_2599 - hypothetical protein, at 2,754,986 to 2,755,663 _2599 Position (kb) 2753 2754 2755Strain fitness (log2 ratio) -2 -1 0 1at 2752.453 kb on - strandat 2752.459 kb on - strandat 2752.464 kb on - strandat 2752.465 kb on - strandat 2752.497 kb on - strandat 2752.502 kb on - strandat 2752.532 kb on + strandat 2752.548 kb on - strand, within Dsui_2597at 2752.568 kb on + strand, within Dsui_2597at 2752.634 kb on + strand, within Dsui_2597at 2752.761 kb on - strand, within Dsui_2597at 2752.785 kb on + strand, within Dsui_2597at 2752.832 kb on - strand, within Dsui_2597at 2752.859 kb on + strand, within Dsui_2597at 2752.867 kb on - strand, within Dsui_2597at 2752.889 kb on - strand, within Dsui_2597at 2752.889 kb on - strand, within Dsui_2597at 2752.889 kb on - strand, within Dsui_2597at 2752.895 kb on - strand, within Dsui_2597at 2752.895 kb on - strand, within Dsui_2597at 2752.895 kb on - strand, within Dsui_2597at 2752.911 kb on + strand, within Dsui_2597at 2752.920 kb on + strand, within Dsui_2597at 2752.968 kb on + strand, within Dsui_2597at 2752.983 kb on - strand, within Dsui_2597at 2753.014 kb on + strand, within Dsui_2597at 2753.022 kb on - strand, within Dsui_2597at 2753.134 kb on - strand, within Dsui_2597at 2753.166 kb on + strand, within Dsui_2597at 2753.179 kb on - strand, within Dsui_2597at 2753.454 kb on - strandat 2753.496 kb on + strandat 2753.523 kb on - strand, within Dsui_2598at 2753.527 kb on + strand, within Dsui_2598at 2753.581 kb on + strand, within Dsui_2598at 2753.589 kb on - strand, within Dsui_2598at 2753.589 kb on - strand, within Dsui_2598at 2753.595 kb on + strand, within Dsui_2598at 2753.595 kb on - strand, within Dsui_2598at 2753.619 kb on + strand, within Dsui_2598at 2753.637 kb on - strand, within Dsui_2598at 2753.761 kb on + strand, within Dsui_2598at 2753.777 kb on + strand, within Dsui_2598at 2753.785 kb on - strand, within Dsui_2598at 2753.785 kb on - strand, within Dsui_2598at 2753.785 kb on - strand, within Dsui_2598at 2753.818 kb on - strand, within Dsui_2598at 2753.827 kb on + strand, within Dsui_2598at 2753.828 kb on - strand, within Dsui_2598at 2753.863 kb on + strand, within Dsui_2598at 2753.869 kb on + strand, within Dsui_2598at 2753.905 kb on + strand, within Dsui_2598at 2753.905 kb on + strand, within Dsui_2598at 2753.905 kb on + strand, within Dsui_2598at 2753.913 kb on - strand, within Dsui_2598at 2753.913 kb on - strand, within Dsui_2598at 2753.913 kb on - strand, within Dsui_2598at 2753.968 kb on + strand, within Dsui_2598at 2754.094 kb on + strand, within Dsui_2598at 2754.203 kb on - strandat 2754.215 kb on - strandat 2754.290 kb on + strandat 2754.293 kb on - strandat 2754.354 kb on + strandat 2754.440 kb on + strandat 2754.448 kb on - strandat 2754.502 kb on - strandat 2754.502 kb on - strandat 2754.572 kb on + strandat 2754.573 kb on - strandat 2754.573 kb on - strandat 2754.580 kb on - strandat 2754.590 kb on - strandat 2754.590 kb on - strandat 2754.648 kb on + strandat 2754.972 kb on + strandat 2755.121 kb on - strand, within Dsui_2599

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml
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2,752,453 - -0.9
2,752,459 - +0.7
2,752,464 - +0.6
2,752,465 - -0.9
2,752,497 - -2.7
2,752,502 - +0.7
2,752,532 + -0.3
2,752,548 - Dsui_2597 0.12 -0.8
2,752,568 + Dsui_2597 0.14 +0.7
2,752,634 + Dsui_2597 0.21 -0.3
2,752,761 - Dsui_2597 0.35 +0.7
2,752,785 + Dsui_2597 0.38 -1.3
2,752,832 - Dsui_2597 0.43 +0.7
2,752,859 + Dsui_2597 0.46 +0.7
2,752,867 - Dsui_2597 0.47 -0.3
2,752,889 - Dsui_2597 0.49 +0.7
2,752,889 - Dsui_2597 0.49 +0.7
2,752,889 - Dsui_2597 0.49 +0.7
2,752,895 - Dsui_2597 0.50 +0.7
2,752,895 - Dsui_2597 0.50 +0.7
2,752,895 - Dsui_2597 0.50 -1.3
2,752,911 + Dsui_2597 0.51 -0.3
2,752,920 + Dsui_2597 0.52 -0.3
2,752,968 + Dsui_2597 0.58 -0.8
2,752,983 - Dsui_2597 0.59 +0.7
2,753,014 + Dsui_2597 0.63 -1.6
2,753,022 - Dsui_2597 0.63 +0.7
2,753,134 - Dsui_2597 0.76 +0.7
2,753,166 + Dsui_2597 0.79 +0.7
2,753,179 - Dsui_2597 0.81 -0.3
2,753,454 - +0.7
2,753,496 + -0.3
2,753,523 - Dsui_2598 0.11 +0.7
2,753,527 + Dsui_2598 0.11 -0.9
2,753,581 + Dsui_2598 0.18 +0.7
2,753,589 - Dsui_2598 0.19 -1.6
2,753,589 - Dsui_2598 0.19 -1.9
2,753,595 + Dsui_2598 0.19 -0.3
2,753,595 - Dsui_2598 0.19 +0.7
2,753,619 + Dsui_2598 0.22 +0.7
2,753,637 - Dsui_2598 0.25 +0.7
2,753,761 + Dsui_2598 0.40 +0.7
2,753,777 + Dsui_2598 0.42 +0.7
2,753,785 - Dsui_2598 0.43 +0.7
2,753,785 - Dsui_2598 0.43 +0.7
2,753,785 - Dsui_2598 0.43 +0.7
2,753,818 - Dsui_2598 0.47 +0.7
2,753,827 + Dsui_2598 0.48 +0.7
2,753,828 - Dsui_2598 0.48 +0.7
2,753,863 + Dsui_2598 0.52 -0.3
2,753,869 + Dsui_2598 0.53 -1.6
2,753,905 + Dsui_2598 0.57 +0.7
2,753,905 + Dsui_2598 0.57 -0.3
2,753,905 + Dsui_2598 0.57 -2.1
2,753,913 - Dsui_2598 0.58 -0.9
2,753,913 - Dsui_2598 0.58 +0.7
2,753,913 - Dsui_2598 0.58 -0.9
2,753,968 + Dsui_2598 0.65 +0.7
2,754,094 + Dsui_2598 0.80 +0.7
2,754,203 - -0.9
2,754,215 - -1.3
2,754,290 + +0.7
2,754,293 - -0.3
2,754,354 + +0.7
2,754,440 + +0.7
2,754,448 - +0.7
2,754,502 - +0.7
2,754,502 - -1.9
2,754,572 + +0.7
2,754,573 - -0.3
2,754,573 - -0.3
2,754,580 - +0.7
2,754,590 - -1.6
2,754,590 - -0.9
2,754,648 + -0.3
2,754,972 + +0.7
2,755,121 - Dsui_2599 0.20 +0.7

Or see this region's nucleotide sequence