Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2412 and Dsui_2413 are separated by 33 nucleotides Dsui_2413 and Dsui_2414 are separated by 102 nucleotides Dsui_2414 and Dsui_2415 are separated by 168 nucleotides
Dsui_2412: Dsui_2412 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,563,566 to 2,566,304
_2412
Dsui_2413: Dsui_2413 - DNA repair protein RadA, at 2,566,338 to 2,567,711
_2413
Dsui_2414: Dsui_2414 - hypothetical protein, at 2,567,814 to 2,568,419
_2414
Dsui_2415: Dsui_2415 - putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 2,568,588 to 2,571,089
_2415
Position (kb)
2566
2567
2568 Strain fitness (log2 ratio)
-2
-1
0
1 at 2565.352 kb on + strand, within Dsui_2412 at 2565.408 kb on + strand, within Dsui_2412 at 2565.424 kb on + strand at 2565.523 kb on + strand, within Dsui_2412 at 2565.597 kb on + strand at 2565.639 kb on + strand, within Dsui_2412 at 2565.670 kb on + strand, within Dsui_2412 at 2565.685 kb on + strand, within Dsui_2412 at 2565.686 kb on - strand at 2565.793 kb on + strand, within Dsui_2412 at 2565.815 kb on + strand, within Dsui_2412 at 2565.913 kb on + strand, within Dsui_2412 at 2565.913 kb on + strand, within Dsui_2412 at 2565.990 kb on - strand at 2566.170 kb on + strand at 2566.232 kb on + strand at 2566.326 kb on - strand at 2566.355 kb on + strand at 2566.436 kb on + strand at 2566.530 kb on + strand, within Dsui_2413 at 2566.558 kb on + strand, within Dsui_2413 at 2566.576 kb on - strand at 2566.591 kb on - strand at 2566.669 kb on + strand, within Dsui_2413 at 2566.908 kb on + strand, within Dsui_2413 at 2567.153 kb on + strand, within Dsui_2413 at 2567.200 kb on + strand, within Dsui_2413 at 2567.355 kb on + strand, within Dsui_2413 at 2567.419 kb on + strand, within Dsui_2413 at 2567.420 kb on + strand, within Dsui_2413 at 2567.716 kb on + strand at 2567.811 kb on + strand at 2567.957 kb on + strand at 2567.965 kb on + strand, within Dsui_2414 at 2567.965 kb on + strand, within Dsui_2414 at 2567.984 kb on - strand at 2567.984 kb on - strand at 2568.015 kb on + strand at 2568.159 kb on - strand at 2568.219 kb on + strand at 2568.229 kb on + strand at 2568.286 kb on + strand at 2568.418 kb on - strand at 2568.535 kb on + strand at 2568.540 kb on + strand at 2568.540 kb on + strand at 2568.540 kb on + strand at 2568.619 kb on + strand at 2568.651 kb on + strand at 2568.651 kb on + strand at 2568.652 kb on + strand at 2568.680 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 2,565,352 + Dsui_2412 0.65 +0.8 2,565,408 + Dsui_2412 0.67 +0.1 2,565,424 + -0.2 2,565,523 + Dsui_2412 0.71 -1.5 2,565,597 + +0.8 2,565,639 + Dsui_2412 0.76 -1.5 2,565,670 + Dsui_2412 0.77 -0.2 2,565,685 + Dsui_2412 0.77 -1.8 2,565,686 - +0.8 2,565,793 + Dsui_2412 0.81 -1.2 2,565,815 + Dsui_2412 0.82 -0.2 2,565,913 + Dsui_2412 0.86 +0.8 2,565,913 + Dsui_2412 0.86 -1.5 2,565,990 - -0.2 2,566,170 + +0.8 2,566,232 + +0.8 2,566,326 - -0.8 2,566,355 + -0.9 2,566,436 + +0.1 2,566,530 + Dsui_2413 0.14 -0.6 2,566,558 + Dsui_2413 0.16 -0.2 2,566,576 - +0.8 2,566,591 - -1.2 2,566,669 + Dsui_2413 0.24 -0.1 2,566,908 + Dsui_2413 0.41 -0.8 2,567,153 + Dsui_2413 0.59 +0.1 2,567,200 + Dsui_2413 0.63 -0.4 2,567,355 + Dsui_2413 0.74 +0.8 2,567,419 + Dsui_2413 0.79 -1.3 2,567,420 + Dsui_2413 0.79 -0.6 2,567,716 + -0.3 2,567,811 + +0.8 2,567,957 + +0.8 2,567,965 + Dsui_2414 0.25 -0.2 2,567,965 + Dsui_2414 0.25 -1.2 2,567,984 - +0.8 2,567,984 - +0.8 2,568,015 + -0.2 2,568,159 - -0.8 2,568,219 + +0.8 2,568,229 + -0.8 2,568,286 + +0.8 2,568,418 - +0.8 2,568,535 + +0.8 2,568,540 + +0.8 2,568,540 + +0.8 2,568,540 + -0.8 2,568,619 + +0.8 2,568,651 + -0.8 2,568,651 + +0.8 2,568,652 + -1.5 2,568,680 + -1.5
Or see this region's nucleotide sequence