Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2254 and Dsui_2255 are separated by 53 nucleotides Dsui_2255 and Dsui_2256 are separated by 281 nucleotides
Dsui_2254: Dsui_2254 - glycine/serine hydroxymethyltransferase, at 2,403,229 to 2,404,531
_2254
Dsui_2255: Dsui_2255 - cAMP-binding protein, at 2,404,585 to 2,405,301
_2255
Dsui_2256: Dsui_2256 - flavodoxin reductase family protein, at 2,405,583 to 2,406,359
_2256
Position (kb)
2404
2405
2406 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2403.596 kb on - strand at 2403.656 kb on + strand at 2403.875 kb on + strand, within Dsui_2254 at 2403.896 kb on + strand, within Dsui_2254 at 2403.949 kb on - strand at 2403.987 kb on - strand, within Dsui_2254 at 2404.056 kb on - strand at 2404.075 kb on - strand, within Dsui_2254 at 2404.075 kb on - strand, within Dsui_2254 at 2404.123 kb on + strand, within Dsui_2254 at 2404.183 kb on - strand, within Dsui_2254 at 2404.246 kb on - strand, within Dsui_2254 at 2404.251 kb on - strand, within Dsui_2254 at 2404.265 kb on + strand, within Dsui_2254 at 2404.274 kb on - strand, within Dsui_2254 at 2404.276 kb on + strand, within Dsui_2254 at 2404.287 kb on + strand, within Dsui_2254 at 2404.295 kb on - strand at 2404.539 kb on - strand at 2404.607 kb on + strand at 2404.615 kb on - strand at 2404.615 kb on - strand at 2404.615 kb on - strand at 2404.677 kb on + strand, within Dsui_2255 at 2404.685 kb on - strand, within Dsui_2255 at 2404.829 kb on - strand, within Dsui_2255 at 2404.846 kb on - strand, within Dsui_2255 at 2404.868 kb on + strand at 2404.894 kb on + strand, within Dsui_2255 at 2404.894 kb on + strand at 2404.902 kb on - strand, within Dsui_2255 at 2404.953 kb on - strand, within Dsui_2255 at 2404.991 kb on + strand at 2405.009 kb on + strand, within Dsui_2255 at 2405.199 kb on + strand, within Dsui_2255 at 2405.222 kb on + strand, within Dsui_2255 at 2405.273 kb on + strand at 2405.278 kb on + strand at 2405.278 kb on + strand at 2405.286 kb on - strand at 2405.286 kb on - strand at 2405.311 kb on + strand at 2405.311 kb on + strand at 2405.378 kb on + strand at 2405.419 kb on - strand at 2405.419 kb on - strand at 2405.488 kb on + strand at 2405.488 kb on + strand at 2405.489 kb on - strand at 2405.653 kb on - strand at 2405.714 kb on - strand, within Dsui_2256 at 2405.905 kb on - strand, within Dsui_2256 at 2405.905 kb on - strand, within Dsui_2256 at 2405.905 kb on - strand, within Dsui_2256 at 2405.975 kb on - strand, within Dsui_2256 at 2406.130 kb on - strand, within Dsui_2256 at 2406.130 kb on - strand, within Dsui_2256 at 2406.157 kb on - strand, within Dsui_2256 at 2406.230 kb on - strand, within Dsui_2256
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 2,403,596 - +1.0 2,403,656 + +1.0 2,403,875 + Dsui_2254 0.50 -0.0 2,403,896 + Dsui_2254 0.51 -1.0 2,403,949 - -0.0 2,403,987 - Dsui_2254 0.58 +1.0 2,404,056 - +1.0 2,404,075 - Dsui_2254 0.65 -0.6 2,404,075 - Dsui_2254 0.65 -0.0 2,404,123 + Dsui_2254 0.69 -0.6 2,404,183 - Dsui_2254 0.73 -0.0 2,404,246 - Dsui_2254 0.78 -1.6 2,404,251 - Dsui_2254 0.78 -1.4 2,404,265 + Dsui_2254 0.80 +1.0 2,404,274 - Dsui_2254 0.80 -1.4 2,404,276 + Dsui_2254 0.80 +1.0 2,404,287 + Dsui_2254 0.81 -1.0 2,404,295 - +1.0 2,404,539 - +0.7 2,404,607 + -0.0 2,404,615 - -0.3 2,404,615 - +1.5 2,404,615 - -0.8 2,404,677 + Dsui_2255 0.13 +1.0 2,404,685 - Dsui_2255 0.14 -0.3 2,404,829 - Dsui_2255 0.34 -0.2 2,404,846 - Dsui_2255 0.36 -0.4 2,404,868 + +1.0 2,404,894 + Dsui_2255 0.43 +1.0 2,404,894 + +1.0 2,404,902 - Dsui_2255 0.44 +0.4 2,404,953 - Dsui_2255 0.51 -0.3 2,404,991 + +1.0 2,405,009 + Dsui_2255 0.59 -1.3 2,405,199 + Dsui_2255 0.86 -2.0 2,405,222 + Dsui_2255 0.89 +1.0 2,405,273 + +1.0 2,405,278 + -0.0 2,405,278 + -2.0 2,405,286 - -0.3 2,405,286 - -0.2 2,405,311 + -0.0 2,405,311 + -2.8 2,405,378 + -2.5 2,405,419 - -0.0 2,405,419 - -0.1 2,405,488 + -0.6 2,405,488 + -0.0 2,405,489 - -0.1 2,405,653 - +1.3 2,405,714 - Dsui_2256 0.17 +1.1 2,405,905 - Dsui_2256 0.41 +1.3 2,405,905 - Dsui_2256 0.41 +1.2 2,405,905 - Dsui_2256 0.41 +1.3 2,405,975 - Dsui_2256 0.50 +1.2 2,406,130 - Dsui_2256 0.70 +0.8 2,406,130 - Dsui_2256 0.70 +1.3 2,406,157 - Dsui_2256 0.74 +1.3 2,406,230 - Dsui_2256 0.83 +1.4
Or see this region's nucleotide sequence