Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1922 and Dsui_1923 are separated by 609 nucleotides Dsui_1923 and Dsui_1924 overlap by 4 nucleotides
Dsui_1922: Dsui_1922 - outer membrane receptor for ferrienterochelin and colicins, at 2,027,127 to 2,029,406
_1922
Dsui_1923: Dsui_1923 - ribonucleotide reductase, beta subunit, at 2,030,016 to 2,031,200
_1923
Dsui_1924: Dsui_1924 - ribonucleoside-diphosphate reductase, alpha subunit, at 2,031,197 to 2,034,043
_1924
Position (kb)
2030
2031
2032 Strain fitness (log2 ratio)
-1
0
1
2 at 2029.046 kb on + strand, within Dsui_1922 at 2029.296 kb on + strand at 2029.296 kb on + strand at 2029.296 kb on + strand at 2029.339 kb on - strand at 2029.674 kb on - strand at 2029.708 kb on + strand at 2029.764 kb on - strand at 2029.845 kb on + strand at 2029.853 kb on - strand at 2029.853 kb on - strand at 2030.014 kb on + strand at 2030.097 kb on - strand at 2030.115 kb on - strand at 2030.274 kb on - strand, within Dsui_1923 at 2030.287 kb on + strand, within Dsui_1923 at 2030.287 kb on + strand, within Dsui_1923 at 2030.311 kb on - strand, within Dsui_1923 at 2030.359 kb on + strand at 2030.364 kb on + strand, within Dsui_1923 at 2030.364 kb on + strand at 2030.372 kb on - strand, within Dsui_1923 at 2030.372 kb on - strand, within Dsui_1923 at 2030.435 kb on + strand, within Dsui_1923 at 2030.496 kb on - strand, within Dsui_1923 at 2030.588 kb on - strand, within Dsui_1923 at 2030.623 kb on - strand, within Dsui_1923 at 2030.656 kb on - strand, within Dsui_1923 at 2030.704 kb on - strand, within Dsui_1923 at 2030.802 kb on - strand, within Dsui_1923 at 2030.935 kb on + strand at 2030.943 kb on - strand, within Dsui_1923 at 2030.987 kb on - strand, within Dsui_1923 at 2031.022 kb on - strand, within Dsui_1923 at 2031.322 kb on + strand at 2031.330 kb on - strand at 2031.333 kb on + strand at 2031.426 kb on - strand at 2031.475 kb on - strand at 2031.521 kb on - strand, within Dsui_1924 at 2031.586 kb on + strand, within Dsui_1924 at 2031.586 kb on + strand, within Dsui_1924 at 2031.587 kb on - strand, within Dsui_1924 at 2031.594 kb on - strand, within Dsui_1924 at 2031.594 kb on - strand, within Dsui_1924 at 2031.628 kb on - strand, within Dsui_1924 at 2031.802 kb on - strand, within Dsui_1924 at 2031.858 kb on + strand, within Dsui_1924 at 2032.021 kb on - strand, within Dsui_1924 at 2032.096 kb on + strand at 2032.104 kb on - strand, within Dsui_1924 at 2032.104 kb on - strand, within Dsui_1924 at 2032.141 kb on - strand, within Dsui_1924
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 2,029,046 + Dsui_1922 0.84 +0.1 2,029,296 + +1.1 2,029,296 + +0.1 2,029,296 + +1.1 2,029,339 - +1.1 2,029,674 - -0.1 2,029,708 + -0.5 2,029,764 - +0.0 2,029,845 + +0.1 2,029,853 - -0.2 2,029,853 - -0.0 2,030,014 + +1.1 2,030,097 - -0.1 2,030,115 - +0.0 2,030,274 - Dsui_1923 0.22 -0.6 2,030,287 + Dsui_1923 0.23 -0.9 2,030,287 + Dsui_1923 0.23 +1.1 2,030,311 - Dsui_1923 0.25 +0.0 2,030,359 + +0.1 2,030,364 + Dsui_1923 0.29 +1.1 2,030,364 + +1.1 2,030,372 - Dsui_1923 0.30 +0.4 2,030,372 - Dsui_1923 0.30 +0.1 2,030,435 + Dsui_1923 0.35 +0.1 2,030,496 - Dsui_1923 0.41 +0.2 2,030,588 - Dsui_1923 0.48 +0.3 2,030,623 - Dsui_1923 0.51 +0.4 2,030,656 - Dsui_1923 0.54 +0.4 2,030,704 - Dsui_1923 0.58 -0.0 2,030,802 - Dsui_1923 0.66 +0.2 2,030,935 + +0.5 2,030,943 - Dsui_1923 0.78 -0.2 2,030,987 - Dsui_1923 0.82 +0.2 2,031,022 - Dsui_1923 0.85 +0.3 2,031,322 + -0.9 2,031,330 - -0.0 2,031,333 + -0.5 2,031,426 - -0.1 2,031,475 - +0.4 2,031,521 - Dsui_1924 0.11 +0.4 2,031,586 + Dsui_1924 0.14 -0.5 2,031,586 + Dsui_1924 0.14 +1.1 2,031,587 - Dsui_1924 0.14 +0.5 2,031,594 - Dsui_1924 0.14 +0.7 2,031,594 - Dsui_1924 0.14 -0.4 2,031,628 - Dsui_1924 0.15 -0.2 2,031,802 - Dsui_1924 0.21 +0.5 2,031,858 + Dsui_1924 0.23 +2.1 2,032,021 - Dsui_1924 0.29 +0.1 2,032,096 + -0.5 2,032,104 - Dsui_1924 0.32 -0.2 2,032,104 - Dsui_1924 0.32 -0.2 2,032,141 - Dsui_1924 0.33 +0.2
Or see this region's nucleotide sequence