Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1883 and Dsui_1884 are separated by 0 nucleotides Dsui_1884 and Dsui_1885 are separated by 13 nucleotides Dsui_1885 and Dsui_1886 overlap by 8 nucleotides
Dsui_1883: Dsui_1883 - ATPase component of ABC transporters with duplicated ATPase domain, at 1,980,741 to 1,982,663
_1883
Dsui_1884: Dsui_1884 - histidine kinase, at 1,982,664 to 1,983,827
_1884
Dsui_1885: Dsui_1885 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,983,841 to 1,984,383
_1885
Dsui_1886: Dsui_1886 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 1,984,376 to 1,985,689
_1886
Position (kb)
1982
1983
1984 Strain fitness (log2 ratio)
-2
-1
0
1 at 1981.885 kb on + strand, within Dsui_1883 at 1981.896 kb on - strand at 1981.921 kb on - strand at 1981.965 kb on + strand, within Dsui_1883 at 1982.086 kb on + strand, within Dsui_1883 at 1982.178 kb on - strand, within Dsui_1883 at 1982.178 kb on - strand, within Dsui_1883 at 1982.212 kb on + strand, within Dsui_1883 at 1982.380 kb on - strand, within Dsui_1883 at 1982.454 kb on - strand at 1982.500 kb on + strand at 1982.568 kb on + strand at 1982.568 kb on + strand at 1982.576 kb on - strand at 1982.849 kb on - strand, within Dsui_1884 at 1983.040 kb on - strand, within Dsui_1884 at 1983.136 kb on + strand, within Dsui_1884 at 1983.293 kb on + strand at 1983.421 kb on + strand, within Dsui_1884 at 1983.435 kb on - strand, within Dsui_1884 at 1983.634 kb on - strand, within Dsui_1884 at 1984.038 kb on - strand, within Dsui_1885 at 1984.043 kb on - strand, within Dsui_1885 at 1984.083 kb on - strand, within Dsui_1885 at 1984.091 kb on + strand, within Dsui_1885 at 1984.223 kb on - strand, within Dsui_1885 at 1984.243 kb on - strand, within Dsui_1885 at 1984.256 kb on + strand, within Dsui_1885 at 1984.406 kb on + strand at 1984.520 kb on + strand, within Dsui_1886 at 1984.673 kb on + strand at 1984.680 kb on - strand, within Dsui_1886 at 1984.680 kb on - strand, within Dsui_1886 at 1984.737 kb on + strand, within Dsui_1886 at 1984.809 kb on - strand, within Dsui_1886
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,981,885 + Dsui_1883 0.59 -0.4 1,981,896 - -0.1 1,981,921 - -0.1 1,981,965 + Dsui_1883 0.64 +0.1 1,982,086 + Dsui_1883 0.70 +0.4 1,982,178 - Dsui_1883 0.75 -0.6 1,982,178 - Dsui_1883 0.75 -1.4 1,982,212 + Dsui_1883 0.76 -2.2 1,982,380 - Dsui_1883 0.85 -1.1 1,982,454 - +0.9 1,982,500 + -0.3 1,982,568 + +0.0 1,982,568 + +0.4 1,982,576 - -0.0 1,982,849 - Dsui_1884 0.16 -1.4 1,983,040 - Dsui_1884 0.32 -0.0 1,983,136 + Dsui_1884 0.41 -1.4 1,983,293 + +1.0 1,983,421 + Dsui_1884 0.65 -1.6 1,983,435 - Dsui_1884 0.66 -2.0 1,983,634 - Dsui_1884 0.83 -0.0 1,984,038 - Dsui_1885 0.36 -0.0 1,984,043 - Dsui_1885 0.37 +1.0 1,984,083 - Dsui_1885 0.45 +1.4 1,984,091 + Dsui_1885 0.46 +1.0 1,984,223 - Dsui_1885 0.70 -0.3 1,984,243 - Dsui_1885 0.74 +1.0 1,984,256 + Dsui_1885 0.76 -0.0 1,984,406 + +1.0 1,984,520 + Dsui_1886 0.11 -1.6 1,984,673 + +0.9 1,984,680 - Dsui_1886 0.23 -0.7 1,984,680 - Dsui_1886 0.23 -0.3 1,984,737 + Dsui_1886 0.27 +0.9 1,984,809 - Dsui_1886 0.33 -0.6
Or see this region's nucleotide sequence