Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1833 and Dsui_1834 are separated by 187 nucleotides Dsui_1834 and Dsui_1835 are separated by 139 nucleotides Dsui_1835 and Dsui_1836 are separated by 185 nucleotides
Dsui_1833: Dsui_1833 - nitrate transport ATP-binding subunits C and D, at 1,932,144 to 1,932,944
_1833
Dsui_1834: Dsui_1834 - hypothetical protein, at 1,933,132 to 1,933,401
_1834
Dsui_1835: Dsui_1835 - glycosyltransferase, at 1,933,541 to 1,934,737
_1835
Dsui_1836: Dsui_1836 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 1,934,923 to 1,936,125
_1836
Position (kb)
1933
1934
1935 Strain fitness (log2 ratio)
-2
-1
0
1 at 1932.611 kb on + strand, within Dsui_1833 at 1932.611 kb on + strand, within Dsui_1833 at 1932.619 kb on - strand at 1932.619 kb on - strand, within Dsui_1833 at 1932.631 kb on - strand, within Dsui_1833 at 1932.705 kb on + strand, within Dsui_1833 at 1932.933 kb on - strand at 1932.958 kb on - strand at 1932.986 kb on - strand at 1933.041 kb on + strand at 1933.049 kb on - strand at 1933.091 kb on - strand at 1933.109 kb on + strand at 1933.117 kb on - strand at 1933.127 kb on - strand at 1933.138 kb on - strand at 1933.186 kb on - strand, within Dsui_1834 at 1933.237 kb on + strand at 1933.339 kb on - strand, within Dsui_1834 at 1933.359 kb on + strand, within Dsui_1834 at 1933.382 kb on - strand at 1933.386 kb on + strand at 1933.396 kb on - strand at 1933.398 kb on + strand at 1933.576 kb on - strand at 1933.613 kb on + strand at 1933.637 kb on + strand at 1933.637 kb on + strand at 1933.986 kb on - strand, within Dsui_1835 at 1933.997 kb on + strand, within Dsui_1835 at 1934.067 kb on + strand at 1934.231 kb on - strand at 1934.240 kb on + strand, within Dsui_1835 at 1934.340 kb on + strand, within Dsui_1835 at 1934.340 kb on + strand, within Dsui_1835 at 1934.386 kb on + strand, within Dsui_1835 at 1934.386 kb on + strand, within Dsui_1835 at 1934.394 kb on - strand, within Dsui_1835 at 1934.615 kb on + strand, within Dsui_1835 at 1934.623 kb on + strand at 1934.691 kb on + strand at 1934.699 kb on - strand at 1935.048 kb on + strand, within Dsui_1836 at 1935.048 kb on + strand, within Dsui_1836 at 1935.091 kb on - strand at 1935.263 kb on + strand, within Dsui_1836 at 1935.302 kb on + strand, within Dsui_1836 at 1935.352 kb on + strand, within Dsui_1836 at 1935.416 kb on + strand, within Dsui_1836 at 1935.421 kb on + strand, within Dsui_1836 at 1935.421 kb on + strand, within Dsui_1836 at 1935.466 kb on - strand, within Dsui_1836 at 1935.567 kb on - strand, within Dsui_1836 at 1935.569 kb on - strand, within Dsui_1836 at 1935.577 kb on + strand, within Dsui_1836
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,932,611 + Dsui_1833 0.58 -1.9 1,932,611 + Dsui_1833 0.58 -0.9 1,932,619 - -0.3 1,932,619 - Dsui_1833 0.59 -0.9 1,932,631 - Dsui_1833 0.61 -2.1 1,932,705 + Dsui_1833 0.70 -0.9 1,932,933 - -0.9 1,932,958 - +0.7 1,932,986 - -0.9 1,933,041 + +0.7 1,933,049 - -2.1 1,933,091 - -0.3 1,933,109 + -0.3 1,933,117 - -0.9 1,933,127 - -0.3 1,933,138 - +0.1 1,933,186 - Dsui_1834 0.20 +0.7 1,933,237 + +0.7 1,933,339 - Dsui_1834 0.77 -0.3 1,933,359 + Dsui_1834 0.84 -0.9 1,933,382 - +0.7 1,933,386 + +0.7 1,933,396 - +0.5 1,933,398 + +0.7 1,933,576 - +0.7 1,933,613 + +0.7 1,933,637 + +0.7 1,933,637 + +0.7 1,933,986 - Dsui_1835 0.37 +0.7 1,933,997 + Dsui_1835 0.38 -0.9 1,934,067 + +0.7 1,934,231 - +0.7 1,934,240 + Dsui_1835 0.58 +0.7 1,934,340 + Dsui_1835 0.67 +0.7 1,934,340 + Dsui_1835 0.67 +0.7 1,934,386 + Dsui_1835 0.71 +0.7 1,934,386 + Dsui_1835 0.71 -1.6 1,934,394 - Dsui_1835 0.71 -0.9 1,934,615 + Dsui_1835 0.90 -0.3 1,934,623 + +0.7 1,934,691 + +0.7 1,934,699 - +0.7 1,935,048 + Dsui_1836 0.10 -0.3 1,935,048 + Dsui_1836 0.10 +0.7 1,935,091 - +0.7 1,935,263 + Dsui_1836 0.28 -0.3 1,935,302 + Dsui_1836 0.32 -0.3 1,935,352 + Dsui_1836 0.36 +0.7 1,935,416 + Dsui_1836 0.41 -1.9 1,935,421 + Dsui_1836 0.41 -1.6 1,935,421 + Dsui_1836 0.41 +0.7 1,935,466 - Dsui_1836 0.45 +0.7 1,935,567 - Dsui_1836 0.54 -1.3 1,935,569 - Dsui_1836 0.54 +0.7 1,935,577 + Dsui_1836 0.54 +0.7
Or see this region's nucleotide sequence