Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1636 and Dsui_1637 are separated by 120 nucleotides Dsui_1637 and Dsui_1638 overlap by 4 nucleotides Dsui_1638 and Dsui_1639 overlap by 1 nucleotides
Dsui_1636: Dsui_1636 - poly(3-hydroxyalkanoate) synthetase, at 1,718,521 to 1,720,278
_1636
Dsui_1637: Dsui_1637 - 2-nitropropane dioxygenase-like enzyme, at 1,720,399 to 1,721,562
_1637
Dsui_1638: Dsui_1638 - methyl-accepting chemotaxis protein, at 1,721,559 to 1,722,224
_1638
Dsui_1639: Dsui_1639 - putative flavoprotein, at 1,722,224 to 1,722,964
_1639
Position (kb)
1720
1721
1722 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1719.450 kb on + strand, within Dsui_1636 at 1719.458 kb on - strand, within Dsui_1636 at 1719.501 kb on + strand, within Dsui_1636 at 1719.551 kb on + strand, within Dsui_1636 at 1719.559 kb on - strand, within Dsui_1636 at 1719.744 kb on + strand, within Dsui_1636 at 1719.797 kb on + strand, within Dsui_1636 at 1719.824 kb on + strand, within Dsui_1636 at 1720.079 kb on + strand, within Dsui_1636 at 1720.079 kb on + strand, within Dsui_1636 at 1720.178 kb on + strand at 1720.259 kb on + strand at 1720.259 kb on + strand at 1720.654 kb on + strand, within Dsui_1637 at 1720.671 kb on + strand, within Dsui_1637 at 1720.969 kb on - strand, within Dsui_1637 at 1721.136 kb on - strand, within Dsui_1637 at 1721.566 kb on - strand at 1721.571 kb on - strand at 1721.588 kb on + strand at 1721.620 kb on + strand at 1721.681 kb on + strand, within Dsui_1638 at 1721.681 kb on + strand, within Dsui_1638 at 1721.689 kb on - strand, within Dsui_1638 at 1721.717 kb on + strand, within Dsui_1638 at 1721.773 kb on + strand, within Dsui_1638 at 1721.786 kb on + strand, within Dsui_1638 at 1721.824 kb on + strand, within Dsui_1638 at 1721.858 kb on - strand, within Dsui_1638 at 1721.907 kb on - strand, within Dsui_1638 at 1722.080 kb on - strand, within Dsui_1638 at 1722.178 kb on + strand at 1722.180 kb on + strand at 1722.362 kb on - strand, within Dsui_1639 at 1722.479 kb on + strand, within Dsui_1639 at 1722.511 kb on + strand, within Dsui_1639
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,719,450 + Dsui_1636 0.53 +1.2 1,719,458 - Dsui_1636 0.53 -1.4 1,719,501 + Dsui_1636 0.56 -2.9 1,719,551 + Dsui_1636 0.59 +0.2 1,719,559 - Dsui_1636 0.59 -1.4 1,719,744 + Dsui_1636 0.70 -0.2 1,719,797 + Dsui_1636 0.73 -0.7 1,719,824 + Dsui_1636 0.74 +0.1 1,720,079 + Dsui_1636 0.89 -2.7 1,720,079 + Dsui_1636 0.89 +0.6 1,720,178 + -0.4 1,720,259 + -0.8 1,720,259 + -0.1 1,720,654 + Dsui_1637 0.22 +0.2 1,720,671 + Dsui_1637 0.23 -1.2 1,720,969 - Dsui_1637 0.49 -1.4 1,721,136 - Dsui_1637 0.63 -0.9 1,721,566 - -0.9 1,721,571 - -0.9 1,721,588 + -0.3 1,721,620 + -0.2 1,721,681 + Dsui_1638 0.18 -0.2 1,721,681 + Dsui_1638 0.18 -0.2 1,721,689 - Dsui_1638 0.20 -1.4 1,721,717 + Dsui_1638 0.24 -0.3 1,721,773 + Dsui_1638 0.32 -0.4 1,721,786 + Dsui_1638 0.34 -0.4 1,721,824 + Dsui_1638 0.40 +0.0 1,721,858 - Dsui_1638 0.45 -2.4 1,721,907 - Dsui_1638 0.52 -3.5 1,722,080 - Dsui_1638 0.78 -0.4 1,722,178 + +0.1 1,722,180 + +0.1 1,722,362 - Dsui_1639 0.19 -0.9 1,722,479 + Dsui_1639 0.34 -0.3 1,722,511 + Dsui_1639 0.39 -0.2
Or see this region's nucleotide sequence