Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1454 and Dsui_1455 overlap by 1 nucleotides Dsui_1455 and Dsui_1456 are separated by 10 nucleotides
Dsui_1454: Dsui_1454 - Rhodanese-like protein,cyclic nucleotide-binding protein, at 1,511,645 to 1,512,727
_1454
Dsui_1455: Dsui_1455 - type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB, at 1,512,727 to 1,515,093
_1455
Dsui_1456: Dsui_1456 - HD-GYP domain-containing protein, at 1,515,104 to 1,516,692
_1456
Position (kb)
1512
1513
1514
1515
1516 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1511.934 kb on + strand, within Dsui_1454 at 1512.191 kb on - strand at 1512.438 kb on - strand at 1512.444 kb on + strand, within Dsui_1454 at 1512.499 kb on - strand at 1512.509 kb on - strand, within Dsui_1454 at 1512.650 kb on - strand at 1512.747 kb on - strand at 1512.862 kb on - strand at 1512.900 kb on + strand at 1512.904 kb on + strand at 1512.914 kb on - strand at 1512.927 kb on + strand at 1512.992 kb on + strand, within Dsui_1455 at 1513.002 kb on + strand, within Dsui_1455 at 1513.062 kb on - strand, within Dsui_1455 at 1513.092 kb on + strand, within Dsui_1455 at 1513.392 kb on + strand, within Dsui_1455 at 1513.442 kb on + strand, within Dsui_1455 at 1513.520 kb on - strand, within Dsui_1455 at 1513.606 kb on - strand, within Dsui_1455 at 1513.686 kb on - strand, within Dsui_1455 at 1513.848 kb on + strand, within Dsui_1455 at 1513.961 kb on + strand, within Dsui_1455 at 1513.961 kb on + strand at 1514.070 kb on - strand, within Dsui_1455 at 1514.113 kb on - strand, within Dsui_1455 at 1514.191 kb on + strand, within Dsui_1455 at 1514.199 kb on - strand, within Dsui_1455 at 1514.199 kb on - strand, within Dsui_1455 at 1514.199 kb on - strand at 1514.199 kb on - strand at 1514.201 kb on + strand, within Dsui_1455 at 1514.201 kb on + strand, within Dsui_1455 at 1514.209 kb on - strand, within Dsui_1455 at 1514.209 kb on - strand, within Dsui_1455 at 1514.209 kb on - strand, within Dsui_1455 at 1514.215 kb on + strand at 1514.323 kb on + strand, within Dsui_1455 at 1514.357 kb on - strand, within Dsui_1455 at 1514.359 kb on + strand, within Dsui_1455 at 1514.409 kb on - strand at 1514.440 kb on + strand, within Dsui_1455 at 1514.491 kb on + strand, within Dsui_1455 at 1514.683 kb on - strand, within Dsui_1455 at 1514.727 kb on + strand, within Dsui_1455 at 1514.744 kb on + strand, within Dsui_1455 at 1514.749 kb on - strand, within Dsui_1455 at 1514.808 kb on - strand, within Dsui_1455 at 1514.853 kb on + strand, within Dsui_1455 at 1514.921 kb on - strand at 1515.016 kb on - strand at 1515.050 kb on - strand at 1515.130 kb on - strand at 1515.132 kb on + strand at 1515.188 kb on - strand at 1515.370 kb on + strand, within Dsui_1456 at 1515.378 kb on - strand, within Dsui_1456 at 1515.496 kb on - strand, within Dsui_1456 at 1515.604 kb on + strand, within Dsui_1456 at 1515.719 kb on + strand, within Dsui_1456 at 1515.925 kb on - strand, within Dsui_1456 at 1515.947 kb on + strand, within Dsui_1456
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,511,934 + Dsui_1454 0.27 -0.6 1,512,191 - +0.6 1,512,438 - +0.6 1,512,444 + Dsui_1454 0.74 -0.4 1,512,499 - +0.6 1,512,509 - Dsui_1454 0.80 -0.4 1,512,650 - +0.6 1,512,747 - -1.0 1,512,862 - -1.0 1,512,900 + +0.1 1,512,904 + -2.6 1,512,914 - +0.6 1,512,927 + +1.2 1,512,992 + Dsui_1455 0.11 +0.6 1,513,002 + Dsui_1455 0.12 -0.4 1,513,062 - Dsui_1455 0.14 +0.6 1,513,092 + Dsui_1455 0.15 -0.3 1,513,392 + Dsui_1455 0.28 -0.4 1,513,442 + Dsui_1455 0.30 +0.1 1,513,520 - Dsui_1455 0.34 -2.7 1,513,606 - Dsui_1455 0.37 -0.4 1,513,686 - Dsui_1455 0.41 -0.4 1,513,848 + Dsui_1455 0.47 +0.6 1,513,961 + Dsui_1455 0.52 -1.4 1,513,961 + +0.6 1,514,070 - Dsui_1455 0.57 -1.0 1,514,113 - Dsui_1455 0.59 -2.7 1,514,191 + Dsui_1455 0.62 -1.7 1,514,199 - Dsui_1455 0.62 -1.4 1,514,199 - Dsui_1455 0.62 +0.6 1,514,199 - +0.6 1,514,199 - -0.4 1,514,201 + Dsui_1455 0.62 -0.4 1,514,201 + Dsui_1455 0.62 -0.4 1,514,209 - Dsui_1455 0.63 -1.0 1,514,209 - Dsui_1455 0.63 +0.6 1,514,209 - Dsui_1455 0.63 -1.4 1,514,215 + -0.4 1,514,323 + Dsui_1455 0.67 -1.0 1,514,357 - Dsui_1455 0.69 +0.6 1,514,359 + Dsui_1455 0.69 -0.4 1,514,409 - -1.0 1,514,440 + Dsui_1455 0.72 -1.1 1,514,491 + Dsui_1455 0.75 -0.4 1,514,683 - Dsui_1455 0.83 -0.4 1,514,727 + Dsui_1455 0.84 -0.9 1,514,744 + Dsui_1455 0.85 -1.4 1,514,749 - Dsui_1455 0.85 -0.4 1,514,808 - Dsui_1455 0.88 -1.0 1,514,853 + Dsui_1455 0.90 -1.4 1,514,921 - -1.4 1,515,016 - +0.6 1,515,050 - -0.4 1,515,130 - +0.6 1,515,132 + +0.4 1,515,188 - +0.6 1,515,370 + Dsui_1456 0.17 -3.1 1,515,378 - Dsui_1456 0.17 +0.6 1,515,496 - Dsui_1456 0.25 +0.6 1,515,604 + Dsui_1456 0.31 -1.4 1,515,719 + Dsui_1456 0.39 -0.4 1,515,925 - Dsui_1456 0.52 -0.4 1,515,947 + Dsui_1456 0.53 +0.2
Or see this region's nucleotide sequence