Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1397 and Dsui_1398 are separated by 157 nucleotides Dsui_1398 and Dsui_1399 overlap by 8 nucleotides Dsui_1399 and Dsui_1400 overlap by 1 nucleotides
Dsui_1397: Dsui_1397 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,457,308 to 1,458,771
_1397
Dsui_1398: Dsui_1398 - ABC-type transport system involved in resistance to organic solvents, ATPase component, at 1,458,929 to 1,459,750
_1398
Dsui_1399: Dsui_1399 - conserved hypothetical integral membrane protein, at 1,459,743 to 1,460,525
_1399
Dsui_1400: Dsui_1400 - ABC-type transport system involved in resistance to organic solvents, periplasmic component, at 1,460,525 to 1,460,995
_1400
Position (kb)
1458
1459
1460 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1457.944 kb on + strand, within Dsui_1397 at 1458.115 kb on - strand, within Dsui_1397 at 1458.126 kb on - strand, within Dsui_1397 at 1458.130 kb on - strand, within Dsui_1397 at 1458.286 kb on - strand, within Dsui_1397 at 1458.290 kb on + strand, within Dsui_1397 at 1458.307 kb on + strand at 1458.363 kb on + strand, within Dsui_1397 at 1458.371 kb on - strand, within Dsui_1397 at 1458.371 kb on - strand, within Dsui_1397 at 1458.539 kb on - strand, within Dsui_1397 at 1458.621 kb on + strand, within Dsui_1397 at 1458.644 kb on + strand at 1458.657 kb on - strand at 1458.677 kb on + strand at 1458.682 kb on + strand at 1458.685 kb on - strand at 1458.685 kb on - strand at 1458.697 kb on + strand at 1458.705 kb on - strand at 1458.705 kb on - strand at 1458.713 kb on + strand at 1458.727 kb on - strand at 1458.781 kb on + strand at 1458.810 kb on - strand at 1458.823 kb on + strand at 1458.872 kb on + strand at 1458.872 kb on + strand at 1458.878 kb on + strand at 1458.880 kb on - strand at 1458.880 kb on - strand at 1458.880 kb on - strand at 1458.880 kb on - strand at 1458.886 kb on - strand at 1459.033 kb on + strand, within Dsui_1398 at 1459.134 kb on - strand, within Dsui_1398 at 1459.148 kb on - strand at 1459.562 kb on - strand at 1459.638 kb on + strand, within Dsui_1398 at 1459.729 kb on + strand at 1459.730 kb on - strand at 1459.737 kb on - strand at 1459.737 kb on - strand at 1459.837 kb on + strand, within Dsui_1399 at 1459.855 kb on - strand at 1459.856 kb on - strand at 1459.864 kb on + strand, within Dsui_1399 at 1459.896 kb on + strand, within Dsui_1399 at 1459.961 kb on - strand at 1460.072 kb on + strand, within Dsui_1399 at 1460.123 kb on + strand, within Dsui_1399 at 1460.123 kb on + strand, within Dsui_1399 at 1460.131 kb on - strand, within Dsui_1399 at 1460.199 kb on + strand, within Dsui_1399 at 1460.217 kb on + strand, within Dsui_1399 at 1460.229 kb on + strand, within Dsui_1399 at 1460.255 kb on + strand, within Dsui_1399 at 1460.450 kb on + strand at 1460.471 kb on + strand at 1460.486 kb on + strand at 1460.496 kb on - strand at 1460.529 kb on + strand at 1460.529 kb on + strand at 1460.529 kb on + strand at 1460.590 kb on - strand, within Dsui_1400 at 1460.684 kb on - strand, within Dsui_1400 at 1460.747 kb on + strand, within Dsui_1400
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,457,944 + Dsui_1397 0.43 +0.5 1,458,115 - Dsui_1397 0.55 -1.8 1,458,126 - Dsui_1397 0.56 -3.4 1,458,130 - Dsui_1397 0.56 -0.5 1,458,286 - Dsui_1397 0.67 +0.5 1,458,290 + Dsui_1397 0.67 -0.5 1,458,307 + +0.5 1,458,363 + Dsui_1397 0.72 +0.5 1,458,371 - Dsui_1397 0.73 -1.5 1,458,371 - Dsui_1397 0.73 +0.5 1,458,539 - Dsui_1397 0.84 -0.5 1,458,621 + Dsui_1397 0.90 -1.1 1,458,644 + +0.5 1,458,657 - -1.1 1,458,677 + +0.5 1,458,682 + +0.5 1,458,685 - -0.5 1,458,685 - -0.5 1,458,697 + +0.5 1,458,705 - +0.5 1,458,705 - -1.8 1,458,713 + -0.5 1,458,727 - +0.5 1,458,781 + +0.5 1,458,810 - -0.2 1,458,823 + +0.5 1,458,872 + +0.5 1,458,872 + +0.5 1,458,878 + +0.5 1,458,880 - -2.1 1,458,880 - +0.5 1,458,880 - -1.5 1,458,880 - +0.5 1,458,886 - +0.5 1,459,033 + Dsui_1398 0.13 -3.7 1,459,134 - Dsui_1398 0.25 -1.1 1,459,148 - -0.5 1,459,562 - +0.5 1,459,638 + Dsui_1398 0.86 -3.0 1,459,729 + -1.1 1,459,730 - +0.5 1,459,737 - +0.5 1,459,737 - +0.5 1,459,837 + Dsui_1399 0.12 -1.3 1,459,855 - -0.5 1,459,856 - +0.5 1,459,864 + Dsui_1399 0.15 -4.0 1,459,896 + Dsui_1399 0.20 -3.2 1,459,961 - +0.5 1,460,072 + Dsui_1399 0.42 -2.2 1,460,123 + Dsui_1399 0.49 -2.9 1,460,123 + Dsui_1399 0.49 -2.3 1,460,131 - Dsui_1399 0.50 +0.5 1,460,199 + Dsui_1399 0.58 -2.3 1,460,217 + Dsui_1399 0.61 -4.3 1,460,229 + Dsui_1399 0.62 -2.0 1,460,255 + Dsui_1399 0.65 -3.5 1,460,450 + -2.9 1,460,471 + -3.2 1,460,486 + -2.8 1,460,496 - +0.5 1,460,529 + -4.1 1,460,529 + -4.2 1,460,529 + -2.7 1,460,590 - Dsui_1400 0.14 -2.0 1,460,684 - Dsui_1400 0.34 -1.0 1,460,747 + Dsui_1400 0.47 -2.1
Or see this region's nucleotide sequence