Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1394 and Dsui_1395 are separated by 279 nucleotides Dsui_1395 and Dsui_1396 are separated by 154 nucleotides
Dsui_1394: Dsui_1394 - hypothetical protein, at 1,452,557 to 1,453,534
_1394
Dsui_1395: Dsui_1395 - MSHA-type pilus biogenesis protein MshL, at 1,453,814 to 1,455,718
_1395
Dsui_1396: Dsui_1396 - type II secretory pathway, component ExeA (predicted ATPase), at 1,455,873 to 1,457,318
_1396
Position (kb)
1453
1454
1455
1456 Strain fitness (log2 ratio)
-2
-1
0
1 at 1452.830 kb on - strand, within Dsui_1394 at 1452.892 kb on - strand, within Dsui_1394 at 1453.053 kb on - strand at 1453.103 kb on - strand, within Dsui_1394 at 1453.431 kb on - strand, within Dsui_1394 at 1453.468 kb on - strand at 1453.789 kb on - strand at 1453.791 kb on + strand at 1454.147 kb on + strand, within Dsui_1395 at 1454.148 kb on + strand, within Dsui_1395 at 1454.205 kb on + strand at 1454.206 kb on + strand at 1454.253 kb on + strand, within Dsui_1395 at 1454.282 kb on + strand at 1454.352 kb on + strand at 1454.402 kb on + strand, within Dsui_1395 at 1454.456 kb on - strand, within Dsui_1395 at 1454.467 kb on + strand at 1454.467 kb on - strand, within Dsui_1395 at 1454.720 kb on + strand, within Dsui_1395 at 1455.003 kb on + strand, within Dsui_1395 at 1455.255 kb on - strand, within Dsui_1395 at 1455.255 kb on - strand, within Dsui_1395 at 1455.292 kb on - strand, within Dsui_1395 at 1455.297 kb on - strand, within Dsui_1395 at 1455.354 kb on + strand, within Dsui_1395 at 1455.460 kb on - strand, within Dsui_1395 at 1455.503 kb on - strand, within Dsui_1395 at 1455.622 kb on + strand at 1455.622 kb on + strand at 1455.630 kb on - strand at 1455.630 kb on - strand at 1455.701 kb on + strand at 1455.706 kb on + strand at 1455.727 kb on + strand at 1455.733 kb on - strand at 1455.772 kb on + strand at 1455.898 kb on + strand at 1455.898 kb on + strand at 1456.079 kb on - strand, within Dsui_1396 at 1456.160 kb on - strand, within Dsui_1396 at 1456.261 kb on - strand, within Dsui_1396 at 1456.670 kb on + strand, within Dsui_1396
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,452,830 - Dsui_1394 0.28 -1.5 1,452,892 - Dsui_1394 0.34 -1.3 1,453,053 - +0.5 1,453,103 - Dsui_1394 0.56 +0.5 1,453,431 - Dsui_1394 0.89 -1.5 1,453,468 - -0.5 1,453,789 - -0.2 1,453,791 + -0.5 1,454,147 + Dsui_1395 0.17 +0.5 1,454,148 + Dsui_1395 0.18 +0.5 1,454,205 + -1.1 1,454,206 + +0.5 1,454,253 + Dsui_1395 0.23 +0.5 1,454,282 + +0.5 1,454,352 + -0.5 1,454,402 + Dsui_1395 0.31 -1.1 1,454,456 - Dsui_1395 0.34 -0.1 1,454,467 + +0.5 1,454,467 - Dsui_1395 0.34 +0.3 1,454,720 + Dsui_1395 0.48 -1.8 1,455,003 + Dsui_1395 0.62 +0.5 1,455,255 - Dsui_1395 0.76 -1.8 1,455,255 - Dsui_1395 0.76 -1.5 1,455,292 - Dsui_1395 0.78 -0.8 1,455,297 - Dsui_1395 0.78 -0.2 1,455,354 + Dsui_1395 0.81 -1.1 1,455,460 - Dsui_1395 0.86 -1.2 1,455,503 - Dsui_1395 0.89 +1.3 1,455,622 + +0.5 1,455,622 + -1.1 1,455,630 - -0.6 1,455,630 - -0.2 1,455,701 + +0.5 1,455,706 + -1.1 1,455,727 + -2.1 1,455,733 - -0.4 1,455,772 + -0.5 1,455,898 + -0.5 1,455,898 + +0.5 1,456,079 - Dsui_1396 0.14 -1.1 1,456,160 - Dsui_1396 0.20 -0.5 1,456,261 - Dsui_1396 0.27 -2.1 1,456,670 + Dsui_1396 0.55 +0.5
Or see this region's nucleotide sequence