Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1295 and Dsui_1296 are separated by 21 nucleotides Dsui_1296 and Dsui_1297 are separated by 85 nucleotides Dsui_1297 and Dsui_1298 are separated by 5 nucleotides Dsui_1298 and Dsui_1299 are separated by 69 nucleotides
Dsui_1295: Dsui_1295 - lipid A core-O-antigen ligase-like enyme, at 1,357,876 to 1,359,690
_1295
Dsui_1296: Dsui_1296 - putative amidophosphoribosyltransferase, at 1,359,712 to 1,360,437
_1296
Dsui_1297: Dsui_1297 - biotin synthetase, at 1,360,523 to 1,361,530
_1297
Dsui_1298: Dsui_1298 - methylase involved in ubiquinone/menaquinone biosynthesis, at 1,361,536 to 1,362,438
_1298
Dsui_1299: Dsui_1299 - putative membrane protein, at 1,362,508 to 1,363,209
_1299
Position (kb)
1360
1361
1362 Strain fitness (log2 ratio)
-2
-1
0
1 at 1359.531 kb on + strand at 1359.552 kb on + strand at 1359.566 kb on + strand at 1359.566 kb on + strand at 1359.574 kb on - strand at 1359.604 kb on - strand at 1359.622 kb on + strand at 1359.624 kb on - strand at 1359.648 kb on + strand at 1359.658 kb on + strand at 1359.666 kb on - strand at 1359.756 kb on - strand at 1359.842 kb on - strand, within Dsui_1296 at 1359.906 kb on + strand, within Dsui_1296 at 1359.914 kb on - strand, within Dsui_1296 at 1359.970 kb on - strand at 1359.984 kb on - strand, within Dsui_1296 at 1360.080 kb on - strand, within Dsui_1296 at 1360.124 kb on - strand, within Dsui_1296 at 1360.129 kb on - strand, within Dsui_1296 at 1360.226 kb on - strand, within Dsui_1296 at 1360.238 kb on - strand, within Dsui_1296 at 1360.402 kb on + strand at 1360.410 kb on + strand at 1360.410 kb on - strand at 1360.918 kb on + strand, within Dsui_1297 at 1361.279 kb on + strand, within Dsui_1297 at 1361.290 kb on + strand, within Dsui_1297 at 1361.355 kb on + strand, within Dsui_1297 at 1362.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,359,531 + -0.5 1,359,552 + -0.5 1,359,566 + +0.5 1,359,566 + +0.5 1,359,574 - -2.1 1,359,604 - -2.1 1,359,622 + +0.5 1,359,624 - -2.7 1,359,648 + -1.1 1,359,658 + +0.5 1,359,666 - -0.5 1,359,756 - +0.5 1,359,842 - Dsui_1296 0.18 +0.5 1,359,906 + Dsui_1296 0.27 -1.5 1,359,914 - Dsui_1296 0.28 +0.5 1,359,970 - -0.5 1,359,984 - Dsui_1296 0.37 -1.5 1,360,080 - Dsui_1296 0.51 +0.5 1,360,124 - Dsui_1296 0.57 -1.5 1,360,129 - Dsui_1296 0.57 -0.5 1,360,226 - Dsui_1296 0.71 -2.5 1,360,238 - Dsui_1296 0.72 +0.5 1,360,402 + +0.5 1,360,410 + +0.5 1,360,410 - +0.5 1,360,918 + Dsui_1297 0.39 +0.9 1,361,279 + Dsui_1297 0.75 -0.2 1,361,290 + Dsui_1297 0.76 -0.3 1,361,355 + Dsui_1297 0.83 -0.0 1,362,487 - -1.1
Or see this region's nucleotide sequence