Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1218 and Dsui_1219 are separated by 56 nucleotides Dsui_1219 and Dsui_1220 are separated by 136 nucleotides Dsui_1220 and Dsui_1221 are separated by 163 nucleotides Dsui_1221 and Dsui_1222 are separated by 45 nucleotides
Dsui_1218: Dsui_1218 - O-6-methylguanine DNA methyltransferase, at 1,274,135 to 1,274,623
_1218
Dsui_1219: Dsui_1219 - aspartyl-tRNA synthetase, at 1,274,680 to 1,275,261
_1219
Dsui_1220: Dsui_1220 - gamma-glutamyl phosphate reductase, at 1,275,398 to 1,276,654
_1220
Dsui_1221: Dsui_1221 - hypothetical protein, at 1,276,818 to 1,277,090
_1221
Dsui_1222: Dsui_1222 - DNA polymerase III, delta subunit, at 1,277,136 to 1,278,137
_1222
Position (kb)
1275
1276
1277 Strain fitness (log2 ratio)
-2
-1
0
1 at 1274.589 kb on + strand at 1274.589 kb on + strand at 1274.670 kb on + strand at 1274.678 kb on - strand at 1274.681 kb on + strand at 1274.725 kb on - strand at 1274.735 kb on - strand at 1274.762 kb on - strand, within Dsui_1219 at 1274.900 kb on + strand, within Dsui_1219 at 1274.996 kb on + strand, within Dsui_1219 at 1275.076 kb on + strand, within Dsui_1219 at 1275.089 kb on + strand, within Dsui_1219 at 1275.089 kb on + strand, within Dsui_1219 at 1275.150 kb on + strand, within Dsui_1219 at 1275.218 kb on + strand at 1275.309 kb on - strand at 1275.309 kb on - strand at 1275.309 kb on - strand at 1275.309 kb on - strand at 1275.319 kb on - strand at 1275.394 kb on + strand at 1276.691 kb on + strand at 1276.757 kb on - strand at 1276.822 kb on + strand at 1276.830 kb on - strand at 1276.848 kb on + strand, within Dsui_1221 at 1276.920 kb on + strand, within Dsui_1221 at 1276.937 kb on + strand, within Dsui_1221 at 1277.085 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,274,589 + -1.8 1,274,589 + +0.5 1,274,670 + +0.5 1,274,678 - -0.0 1,274,681 + -1.5 1,274,725 - -0.5 1,274,735 - -0.1 1,274,762 - Dsui_1219 0.14 -0.4 1,274,900 + Dsui_1219 0.38 -0.8 1,274,996 + Dsui_1219 0.54 -0.5 1,275,076 + Dsui_1219 0.68 +0.5 1,275,089 + Dsui_1219 0.70 +0.5 1,275,089 + Dsui_1219 0.70 +0.5 1,275,150 + Dsui_1219 0.81 -1.1 1,275,218 + +0.5 1,275,309 - -0.3 1,275,309 - -0.3 1,275,309 - -0.4 1,275,309 - -0.4 1,275,319 - -0.3 1,275,394 + +0.5 1,276,691 + -2.1 1,276,757 - +0.5 1,276,822 + -0.5 1,276,830 - -0.4 1,276,848 + Dsui_1221 0.11 +0.1 1,276,920 + Dsui_1221 0.37 -0.4 1,276,937 + Dsui_1221 0.44 -0.4 1,277,085 + -0.4
Or see this region's nucleotide sequence