Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1017 and Dsui_1018 are separated by 588 nucleotides Dsui_1018 and Dsui_1019 overlap by 30 nucleotides Dsui_1019 and Dsui_1021 are separated by 796 nucleotides
Dsui_1017: Dsui_1017 - hypothetical protein, at 1,050,402 to 1,050,809
_1017
Dsui_1018: Dsui_1018 - hypothetical protein, at 1,051,398 to 1,051,616
_1018
Dsui_1019: Dsui_1019 - transposase, at 1,051,587 to 1,052,387
_1019
Dsui_1021: Dsui_1021 - NAD(FAD)-dependent dehydrogenase, at 1,053,184 to 1,054,518
_1021
Position (kb)
1051
1052
1053 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1050.613 kb on - strand, within Dsui_1017 at 1050.669 kb on - strand, within Dsui_1017 at 1050.687 kb on + strand, within Dsui_1017 at 1050.694 kb on - strand, within Dsui_1017 at 1050.695 kb on - strand, within Dsui_1017 at 1050.695 kb on - strand, within Dsui_1017 at 1050.697 kb on + strand, within Dsui_1017 at 1050.698 kb on + strand, within Dsui_1017 at 1050.743 kb on - strand, within Dsui_1017 at 1050.821 kb on - strand at 1050.835 kb on - strand at 1050.847 kb on - strand at 1050.863 kb on + strand at 1050.938 kb on + strand at 1050.938 kb on + strand at 1050.943 kb on + strand at 1050.986 kb on + strand at 1051.031 kb on - strand at 1051.031 kb on - strand at 1051.044 kb on + strand at 1051.059 kb on - strand at 1051.139 kb on + strand at 1051.142 kb on + strand at 1051.142 kb on + strand at 1051.142 kb on + strand at 1051.150 kb on - strand at 1051.253 kb on + strand at 1051.253 kb on + strand at 1051.254 kb on - strand at 1051.285 kb on + strand at 1051.293 kb on - strand at 1051.297 kb on - strand at 1051.385 kb on + strand at 1051.454 kb on + strand, within Dsui_1018 at 1051.475 kb on + strand, within Dsui_1018 at 1051.527 kb on - strand, within Dsui_1018 at 1051.535 kb on + strand, within Dsui_1018 at 1051.543 kb on - strand, within Dsui_1018 at 1051.554 kb on - strand, within Dsui_1018 at 1051.554 kb on - strand, within Dsui_1018 at 1051.572 kb on - strand, within Dsui_1018 at 1051.573 kb on - strand, within Dsui_1018 at 1051.573 kb on - strand, within Dsui_1018 at 1051.594 kb on - strand at 1052.745 kb on + strand at 1052.745 kb on + strand at 1052.745 kb on + strand at 1052.753 kb on - strand at 1052.753 kb on - strand at 1052.768 kb on + strand at 1052.789 kb on + strand at 1052.792 kb on - strand at 1052.797 kb on - strand at 1052.799 kb on - strand at 1053.005 kb on + strand at 1053.009 kb on + strand at 1053.028 kb on + strand at 1053.072 kb on - strand at 1053.091 kb on + strand at 1053.099 kb on + strand at 1053.115 kb on + strand at 1053.123 kb on - strand at 1053.173 kb on - strand at 1053.175 kb on + strand at 1053.175 kb on + strand at 1053.183 kb on - strand at 1053.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 1,050,613 - Dsui_1017 0.52 +0.9 1,050,669 - Dsui_1017 0.65 +0.9 1,050,687 + Dsui_1017 0.70 +0.9 1,050,694 - Dsui_1017 0.72 -0.1 1,050,695 - Dsui_1017 0.72 +0.9 1,050,695 - Dsui_1017 0.72 -0.7 1,050,697 + Dsui_1017 0.72 -1.9 1,050,698 + Dsui_1017 0.73 -1.1 1,050,743 - Dsui_1017 0.84 -0.1 1,050,821 - -2.4 1,050,835 - -0.1 1,050,847 - +0.9 1,050,863 + -0.7 1,050,938 + -0.1 1,050,938 + -0.7 1,050,943 + -1.4 1,050,986 + -0.7 1,051,031 - +0.9 1,051,031 - -0.1 1,051,044 + -1.4 1,051,059 - -1.1 1,051,139 + -0.3 1,051,142 + -1.0 1,051,142 + -0.1 1,051,142 + -0.8 1,051,150 - -0.7 1,051,253 + +0.5 1,051,253 + -0.0 1,051,254 - +0.9 1,051,285 + +0.9 1,051,293 - -0.7 1,051,297 - -0.7 1,051,385 + +0.9 1,051,454 + Dsui_1018 0.26 +1.3 1,051,475 + Dsui_1018 0.35 -2.2 1,051,527 - Dsui_1018 0.59 -1.1 1,051,535 + Dsui_1018 0.63 +0.9 1,051,543 - Dsui_1018 0.66 +0.9 1,051,554 - Dsui_1018 0.71 -1.9 1,051,554 - Dsui_1018 0.71 -0.1 1,051,572 - Dsui_1018 0.79 -1.9 1,051,573 - Dsui_1018 0.80 -0.7 1,051,573 - Dsui_1018 0.80 +0.9 1,051,594 - -1.4 1,052,745 + +0.9 1,052,745 + -0.1 1,052,745 + +0.9 1,052,753 - -1.2 1,052,753 - -3.1 1,052,768 + -0.7 1,052,789 + -1.4 1,052,792 - -1.6 1,052,797 - +1.5 1,052,799 - +0.9 1,053,005 + -0.5 1,053,009 + -0.1 1,053,028 + -0.2 1,053,072 - -1.1 1,053,091 + +0.3 1,053,099 + -0.1 1,053,115 + -1.8 1,053,123 - -0.3 1,053,173 - -0.0 1,053,175 + -0.1 1,053,175 + -1.4 1,053,183 - +0.5 1,053,287 + +0.9
Or see this region's nucleotide sequence