Strain Fitness in Dechlorosoma suillum PS around Dsui_0731

Experiment: ALP with Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0729 and Dsui_0730 are separated by 84 nucleotidesDsui_0730 and Dsui_0731 are separated by 18 nucleotidesDsui_0731 and Dsui_0732 are separated by 12 nucleotidesDsui_0732 and Dsui_0733 are separated by 12 nucleotidesDsui_0733 and Dsui_0734 overlap by 4 nucleotides Dsui_0729: Dsui_0729 - putative autotransporter protein,putative Ig domain-containing protein, at 723,897 to 728,669 _0729 Dsui_0730: Dsui_0730 - microcystin-dependent protein, at 728,754 to 729,293 _0730 Dsui_0731: Dsui_0731 - microcystin-dependent protein, at 729,312 to 729,833 _0731 Dsui_0732: Dsui_0732 - microcystin-dependent protein, at 729,846 to 730,379 _0732 Dsui_0733: Dsui_0733 - hypothetical protein, at 730,392 to 730,703 _0733 Dsui_0734: Dsui_0734 - acetyltransferase, at 730,700 to 731,239 _0734 Position (kb) 729 730Strain fitness (log2 ratio) -2 -1 0 1at 728.413 kb on - strandat 728.449 kb on + strandat 728.474 kb on + strandat 728.474 kb on + strandat 728.475 kb on + strandat 728.475 kb on + strandat 728.476 kb on - strandat 728.482 kb on - strandat 728.482 kb on - strandat 728.501 kb on + strandat 728.501 kb on + strandat 728.501 kb on + strandat 728.501 kb on + strandat 728.505 kb on + strandat 728.509 kb on - strandat 728.509 kb on - strandat 728.520 kb on + strandat 728.584 kb on - strandat 728.648 kb on + strandat 728.671 kb on + strandat 728.675 kb on + strandat 728.679 kb on - strandat 728.734 kb on + strandat 728.752 kb on + strandat 728.760 kb on - strandat 728.892 kb on + strand, within Dsui_0730at 728.938 kb on + strand, within Dsui_0730at 728.963 kb on + strand, within Dsui_0730at 728.971 kb on - strand, within Dsui_0730at 728.987 kb on + strand, within Dsui_0730at 728.998 kb on + strand, within Dsui_0730at 729.157 kb on + strand, within Dsui_0730at 729.165 kb on - strand, within Dsui_0730at 729.297 kb on - strandat 729.346 kb on - strandat 729.381 kb on + strand, within Dsui_0731at 729.393 kb on + strand, within Dsui_0731at 729.412 kb on - strand, within Dsui_0731at 729.426 kb on + strand, within Dsui_0731at 729.435 kb on + strand, within Dsui_0731at 729.440 kb on + strand, within Dsui_0731at 729.547 kb on - strand, within Dsui_0731at 729.553 kb on + strand, within Dsui_0731at 729.591 kb on - strand, within Dsui_0731at 729.616 kb on - strand, within Dsui_0731at 729.632 kb on - strand, within Dsui_0731at 729.656 kb on - strand, within Dsui_0731at 729.663 kb on - strand, within Dsui_0731at 729.728 kb on - strand, within Dsui_0731at 729.760 kb on - strand, within Dsui_0731at 729.772 kb on + strand, within Dsui_0731at 729.777 kb on + strand, within Dsui_0731at 729.837 kb on + strandat 729.906 kb on - strand, within Dsui_0732at 730.012 kb on + strand, within Dsui_0732at 730.020 kb on - strand, within Dsui_0732at 730.097 kb on + strand, within Dsui_0732at 730.131 kb on + strandat 730.134 kb on - strand, within Dsui_0732at 730.152 kb on + strand, within Dsui_0732at 730.152 kb on + strand, within Dsui_0732at 730.160 kb on - strand, within Dsui_0732at 730.196 kb on - strand, within Dsui_0732at 730.204 kb on - strand, within Dsui_0732at 730.211 kb on + strand, within Dsui_0732at 730.219 kb on - strand, within Dsui_0732at 730.223 kb on - strand, within Dsui_0732at 730.316 kb on + strand, within Dsui_0732at 730.316 kb on + strandat 730.318 kb on + strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.325 kb on - strand, within Dsui_0732at 730.333 kb on + strandat 730.398 kb on - strandat 730.498 kb on - strand, within Dsui_0733at 730.524 kb on - strand, within Dsui_0733at 730.551 kb on + strand, within Dsui_0733at 730.559 kb on - strand, within Dsui_0733at 730.607 kb on - strand, within Dsui_0733at 730.644 kb on + strand, within Dsui_0733at 730.657 kb on + strandat 730.707 kb on + strandat 730.707 kb on + strandat 730.728 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml
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728,413 - -0.4
728,449 + +0.6
728,474 + +0.6
728,474 + -0.4
728,475 + -1.7
728,475 + -1.0
728,476 - +0.6
728,482 - -1.4
728,482 - +0.6
728,501 + +0.6
728,501 + -0.4
728,501 + -0.4
728,501 + +0.6
728,505 + +1.1
728,509 - -1.4
728,509 - +0.0
728,520 + +0.6
728,584 - -0.4
728,648 + +0.6
728,671 + +0.6
728,675 + +0.6
728,679 - +0.6
728,734 + -1.4
728,752 + -0.4
728,760 - -0.4
728,892 + Dsui_0730 0.26 -0.4
728,938 + Dsui_0730 0.34 -2.4
728,963 + Dsui_0730 0.39 +0.6
728,971 - Dsui_0730 0.40 -1.0
728,987 + Dsui_0730 0.43 -0.4
728,998 + Dsui_0730 0.45 +0.6
729,157 + Dsui_0730 0.75 -1.4
729,165 - Dsui_0730 0.76 +0.6
729,297 - +0.6
729,346 - +0.6
729,381 + Dsui_0731 0.13 -0.4
729,393 + Dsui_0731 0.16 +0.6
729,412 - Dsui_0731 0.19 -2.0
729,426 + Dsui_0731 0.22 +0.6
729,435 + Dsui_0731 0.24 -0.4
729,440 + Dsui_0731 0.25 -2.0
729,547 - Dsui_0731 0.45 +0.6
729,553 + Dsui_0731 0.46 +0.6
729,591 - Dsui_0731 0.53 -0.4
729,616 - Dsui_0731 0.58 -1.4
729,632 - Dsui_0731 0.61 -1.0
729,656 - Dsui_0731 0.66 -0.4
729,663 - Dsui_0731 0.67 -0.4
729,728 - Dsui_0731 0.80 +0.6
729,760 - Dsui_0731 0.86 -0.4
729,772 + Dsui_0731 0.88 -1.7
729,777 + Dsui_0731 0.89 +0.6
729,837 + +0.6
729,906 - Dsui_0732 0.11 +0.6
730,012 + Dsui_0732 0.31 +0.6
730,020 - Dsui_0732 0.33 +0.6
730,097 + Dsui_0732 0.47 -1.4
730,131 + -1.0
730,134 - Dsui_0732 0.54 -0.4
730,152 + Dsui_0732 0.57 -0.4
730,152 + Dsui_0732 0.57 -0.4
730,160 - Dsui_0732 0.59 +0.6
730,196 - Dsui_0732 0.66 -1.4
730,204 - Dsui_0732 0.67 +0.6
730,211 + Dsui_0732 0.68 +0.6
730,219 - Dsui_0732 0.70 -1.4
730,223 - Dsui_0732 0.71 -0.4
730,316 + Dsui_0732 0.88 +0.6
730,316 + +0.6
730,318 + Dsui_0732 0.88 -0.4
730,324 - Dsui_0732 0.90 +0.6
730,324 - Dsui_0732 0.90 +0.6
730,324 - Dsui_0732 0.90 +0.6
730,325 - Dsui_0732 0.90 +0.6
730,333 + -0.4
730,398 - -0.4
730,498 - Dsui_0733 0.34 -0.4
730,524 - Dsui_0733 0.42 +0.6
730,551 + Dsui_0733 0.51 +0.6
730,559 - Dsui_0733 0.54 +0.6
730,607 - Dsui_0733 0.69 +0.6
730,644 + Dsui_0733 0.81 -2.6
730,657 + +0.6
730,707 + +0.6
730,707 + -0.4
730,728 + -1.7

Or see this region's nucleotide sequence