Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0652 and Dsui_0653 are separated by 108 nucleotides Dsui_0653 and Dsui_0654 are separated by 238 nucleotides Dsui_0654 and Dsui_0655 are separated by 125 nucleotides
Dsui_0652: Dsui_0652 - putative membrane protein, at 645,205 to 646,335
_0652
Dsui_0653: Dsui_0653 - putative SAM-dependent methyltransferase, at 646,444 to 647,631
_0653
Dsui_0654: Dsui_0654 - hypothetical protein, at 647,870 to 648,325
_0654
Dsui_0655: Dsui_0655 - putative membrane protein, at 648,451 to 649,077
_0655
Position (kb) 646
647
648 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 645.519 kb on - strand, within Dsui_0652 at 645.722 kb on + strand, within Dsui_0652 at 645.727 kb on + strand, within Dsui_0652 at 645.736 kb on - strand at 645.747 kb on + strand, within Dsui_0652 at 645.790 kb on + strand, within Dsui_0652 at 645.855 kb on - strand at 645.855 kb on - strand at 645.931 kb on + strand, within Dsui_0652 at 645.951 kb on + strand, within Dsui_0652 at 645.957 kb on + strand, within Dsui_0652 at 645.965 kb on + strand, within Dsui_0652 at 646.000 kb on + strand, within Dsui_0652 at 646.045 kb on - strand at 646.138 kb on - strand, within Dsui_0652 at 646.204 kb on - strand, within Dsui_0652 at 646.281 kb on - strand at 646.435 kb on + strand at 646.615 kb on + strand, within Dsui_0653 at 646.632 kb on + strand, within Dsui_0653 at 646.632 kb on + strand, within Dsui_0653 at 646.784 kb on - strand, within Dsui_0653 at 646.905 kb on - strand, within Dsui_0653 at 647.054 kb on + strand, within Dsui_0653 at 647.062 kb on - strand, within Dsui_0653 at 647.079 kb on + strand at 647.106 kb on - strand, within Dsui_0653 at 647.197 kb on + strand at 647.252 kb on - strand, within Dsui_0653 at 647.304 kb on + strand, within Dsui_0653 at 647.304 kb on + strand, within Dsui_0653 at 647.312 kb on - strand, within Dsui_0653 at 647.417 kb on + strand, within Dsui_0653 at 647.445 kb on + strand, within Dsui_0653 at 647.445 kb on + strand, within Dsui_0653 at 647.534 kb on + strand at 647.604 kb on + strand at 647.866 kb on + strand at 647.940 kb on - strand at 647.955 kb on - strand, within Dsui_0654 at 647.967 kb on + strand, within Dsui_0654 at 647.989 kb on - strand, within Dsui_0654 at 647.990 kb on - strand, within Dsui_0654 at 648.044 kb on - strand at 648.101 kb on + strand, within Dsui_0654 at 648.138 kb on + strand, within Dsui_0654 at 648.144 kb on - strand at 648.185 kb on + strand, within Dsui_0654 at 648.190 kb on + strand, within Dsui_0654 at 648.193 kb on - strand, within Dsui_0654 at 648.211 kb on + strand, within Dsui_0654 at 648.225 kb on + strand at 648.226 kb on - strand, within Dsui_0654 at 648.274 kb on + strand, within Dsui_0654 at 648.282 kb on - strand at 648.399 kb on + strand at 648.421 kb on - strand at 648.421 kb on - strand at 648.423 kb on + strand at 648.448 kb on + strand at 648.497 kb on + strand at 648.505 kb on - strand at 648.582 kb on + strand, within Dsui_0655 at 648.592 kb on + strand, within Dsui_0655 at 648.600 kb on - strand, within Dsui_0655 at 648.622 kb on + strand, within Dsui_0655
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 645,519 - Dsui_0652 0.28 -1.4 645,722 + Dsui_0652 0.46 -1.2 645,727 + Dsui_0652 0.46 +0.6 645,736 - +0.6 645,747 + Dsui_0652 0.48 -0.4 645,790 + Dsui_0652 0.52 +0.6 645,855 - +0.6 645,855 - +0.6 645,931 + Dsui_0652 0.64 -1.9 645,951 + Dsui_0652 0.66 +1.6 645,957 + Dsui_0652 0.66 -1.8 645,965 + Dsui_0652 0.67 -1.4 646,000 + Dsui_0652 0.70 -1.0 646,045 - +0.6 646,138 - Dsui_0652 0.82 -0.4 646,204 - Dsui_0652 0.88 +0.6 646,281 - +0.6 646,435 + -1.0 646,615 + Dsui_0653 0.14 -1.0 646,632 + Dsui_0653 0.16 -1.4 646,632 + Dsui_0653 0.16 -0.4 646,784 - Dsui_0653 0.29 -0.4 646,905 - Dsui_0653 0.39 -1.0 647,054 + Dsui_0653 0.51 +0.6 647,062 - Dsui_0653 0.52 -1.8 647,079 + +0.6 647,106 - Dsui_0653 0.56 -2.4 647,197 + +0.6 647,252 - Dsui_0653 0.68 -1.0 647,304 + Dsui_0653 0.72 -0.4 647,304 + Dsui_0653 0.72 -0.4 647,312 - Dsui_0653 0.73 -1.9 647,417 + Dsui_0653 0.82 -1.4 647,445 + Dsui_0653 0.84 -1.8 647,445 + Dsui_0653 0.84 +0.6 647,534 + +0.6 647,604 + -0.4 647,866 + -1.4 647,940 - +0.6 647,955 - Dsui_0654 0.19 +0.6 647,967 + Dsui_0654 0.21 -2.6 647,989 - Dsui_0654 0.26 -0.4 647,990 - Dsui_0654 0.26 -2.8 648,044 - +0.6 648,101 + Dsui_0654 0.51 -3.0 648,138 + Dsui_0654 0.59 -1.0 648,144 - +0.6 648,185 + Dsui_0654 0.69 -1.0 648,190 + Dsui_0654 0.70 +0.6 648,193 - Dsui_0654 0.71 +0.6 648,211 + Dsui_0654 0.75 +0.6 648,225 + +0.6 648,226 - Dsui_0654 0.78 -0.4 648,274 + Dsui_0654 0.89 -1.0 648,282 - -1.0 648,399 + +0.6 648,421 - -2.2 648,421 - +0.6 648,423 + -1.8 648,448 + +0.9 648,497 + -3.0 648,505 - -0.4 648,582 + Dsui_0655 0.21 -1.8 648,592 + Dsui_0655 0.22 -0.2 648,600 - Dsui_0655 0.24 +0.6 648,622 + Dsui_0655 0.27 -1.0
Or see this region's nucleotide sequence