Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0394 and Dsui_0395 are separated by 22 nucleotides Dsui_0395 and Dsui_0396 are separated by 124 nucleotides Dsui_0396 and Dsui_0397 overlap by 4 nucleotides Dsui_0397 and Dsui_0398 overlap by 4 nucleotides
Dsui_0394: Dsui_0394 - sugar kinase, ribokinase, at 392,746 to 393,681
_0394
Dsui_0395: Dsui_0395 - outer membrane lipoprotein, at 393,704 to 394,171
_0395
Dsui_0396: Dsui_0396 - putative hemolysin, at 394,296 to 395,054
_0396
Dsui_0397: Dsui_0397 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 395,051 to 395,878
_0397
Dsui_0398: Dsui_0398 - UDP-glucose-4-epimerase, at 395,875 to 396,888
_0398
Position (kb) 394
395
396 Strain fitness (log2 ratio) -2
-1
0
1 at 393.299 kb on - strand, within Dsui_0394 at 393.319 kb on - strand, within Dsui_0394 at 393.423 kb on - strand, within Dsui_0394 at 393.498 kb on - strand at 393.514 kb on + strand, within Dsui_0394 at 393.519 kb on + strand, within Dsui_0394 at 393.519 kb on + strand, within Dsui_0394 at 393.683 kb on - strand at 393.795 kb on - strand at 393.976 kb on + strand, within Dsui_0395 at 394.091 kb on - strand, within Dsui_0395 at 394.172 kb on + strand at 394.172 kb on + strand at 394.187 kb on - strand at 394.287 kb on + strand at 394.301 kb on - strand at 394.362 kb on - strand at 394.507 kb on - strand, within Dsui_0396 at 394.529 kb on + strand, within Dsui_0396 at 394.625 kb on - strand, within Dsui_0396 at 394.662 kb on - strand, within Dsui_0396 at 394.687 kb on + strand, within Dsui_0396 at 394.702 kb on + strand, within Dsui_0396 at 394.710 kb on - strand at 394.710 kb on - strand, within Dsui_0396 at 394.754 kb on - strand, within Dsui_0396 at 394.776 kb on - strand, within Dsui_0396 at 394.789 kb on - strand, within Dsui_0396 at 394.800 kb on + strand, within Dsui_0396 at 394.821 kb on + strand, within Dsui_0396 at 394.828 kb on - strand, within Dsui_0396 at 394.831 kb on + strand, within Dsui_0396 at 394.897 kb on - strand, within Dsui_0396 at 395.016 kb on + strand at 395.092 kb on - strand at 395.109 kb on - strand at 395.133 kb on + strand at 395.158 kb on - strand, within Dsui_0397 at 395.184 kb on - strand at 395.184 kb on - strand at 395.206 kb on - strand, within Dsui_0397 at 395.280 kb on - strand, within Dsui_0397 at 395.427 kb on + strand, within Dsui_0397 at 395.560 kb on + strand, within Dsui_0397 at 395.729 kb on - strand, within Dsui_0397 at 395.747 kb on - strand, within Dsui_0397 at 395.873 kb on + strand at 395.878 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 393,299 - Dsui_0394 0.59 -1.0 393,319 - Dsui_0394 0.61 +0.6 393,423 - Dsui_0394 0.72 +0.6 393,498 - -0.4 393,514 + Dsui_0394 0.82 -0.8 393,519 + Dsui_0394 0.83 -0.4 393,519 + Dsui_0394 0.83 -0.9 393,683 - -2.0 393,795 - +0.6 393,976 + Dsui_0395 0.58 -0.6 394,091 - Dsui_0395 0.83 +0.6 394,172 + -0.1 394,172 + -0.2 394,187 - +0.6 394,287 + -1.1 394,301 - -1.0 394,362 - -0.4 394,507 - Dsui_0396 0.28 -0.4 394,529 + Dsui_0396 0.31 +0.6 394,625 - Dsui_0396 0.43 -0.4 394,662 - Dsui_0396 0.48 -2.2 394,687 + Dsui_0396 0.52 +0.6 394,702 + Dsui_0396 0.53 -1.0 394,710 - +0.6 394,710 - Dsui_0396 0.55 -1.4 394,754 - Dsui_0396 0.60 -1.0 394,776 - Dsui_0396 0.63 -1.4 394,789 - Dsui_0396 0.65 -0.4 394,800 + Dsui_0396 0.66 -2.2 394,821 + Dsui_0396 0.69 -0.1 394,828 - Dsui_0396 0.70 +0.6 394,831 + Dsui_0396 0.70 -0.5 394,897 - Dsui_0396 0.79 +0.6 395,016 + +0.2 395,092 - +0.6 395,109 - +0.6 395,133 + +0.3 395,158 - Dsui_0397 0.13 -1.0 395,184 - +0.6 395,184 - +0.6 395,206 - Dsui_0397 0.19 +0.6 395,280 - Dsui_0397 0.28 -0.4 395,427 + Dsui_0397 0.45 -1.8 395,560 + Dsui_0397 0.61 -1.8 395,729 - Dsui_0397 0.82 -1.7 395,747 - Dsui_0397 0.84 -1.4 395,873 + -1.0 395,878 + -1.4
Or see this region's nucleotide sequence