Strain Fitness in Dechlorosoma suillum PS around Dsui_0392
Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
390,139 | - | Dsui_0391 | 0.25 | -0.4 | |
390,192 | + | Dsui_0391 | 0.31 | -0.1 | |
390,905 | + | -0.5 | |||
390,908 | - | +0.6 | |||
390,913 | - | -0.4 | |||
390,961 | + | -1.6 | |||
390,966 | - | -1.0 | |||
391,003 | - | -0.4 | |||
391,020 | - | Dsui_0392 | 0.11 | -2.2 | |
391,030 | + | Dsui_0392 | 0.14 | -1.0 | |
391,047 | + | Dsui_0392 | 0.18 | -0.4 | |
391,050 | - | -0.4 | |||
391,055 | - | Dsui_0392 | 0.20 | +0.6 | |
391,133 | - | Dsui_0392 | 0.41 | -0.4 | |
391,166 | + | Dsui_0392 | 0.49 | -1.0 | |
391,170 | + | Dsui_0392 | 0.50 | -2.2 | |
391,179 | - | Dsui_0392 | 0.52 | +0.6 | |
391,204 | + | +0.6 | |||
391,343 | + | -0.4 | |||
391,483 | - | -0.4 | |||
391,562 | + | -0.4 | |||
391,564 | - | Dsui_0393 | 0.10 | -0.4 | |
391,724 | - | Dsui_0393 | 0.23 | -1.4 | |
391,748 | + | +0.6 | |||
391,778 | + | Dsui_0393 | 0.27 | +0.6 | |
391,799 | + | Dsui_0393 | 0.29 | -1.7 | |
391,807 | - | Dsui_0393 | 0.30 | +0.6 | |
391,903 | - | +0.6 | |||
391,903 | - | +0.6 | |||
391,913 | - | +0.6 | |||
391,938 | - | Dsui_0393 | 0.40 | -1.0 | |
392,061 | - | Dsui_0393 | 0.50 | -2.7 | |
392,081 | - | +0.6 | |||
392,099 | - | +0.6 | |||
392,125 | + | Dsui_0393 | 0.55 | -1.4 | |
392,194 | - | +0.6 | |||
392,237 | + | Dsui_0393 | 0.64 | -0.4 |
Or see this region's nucleotide sequence