Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0130 and Dsui_0131 are separated by 445 nucleotides Dsui_0131 and Dsui_0132 are separated by 101 nucleotides
Dsui_0130: Dsui_0130 - malic enzyme, at 128,463 to 130,739
_0130
Dsui_0131: Dsui_0131 - phosphoenolpyruvate carboxykinase (GTP), at 131,185 to 133,044
_0131
Dsui_0132: Dsui_0132 - aspartate/tyrosine/aromatic aminotransferase, at 133,146 to 134,303
_0132
Position (kb) 131
132
133
134 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.308 kb on - strand, within Dsui_0130 at 130.311 kb on + strand, within Dsui_0130 at 130.318 kb on + strand, within Dsui_0130 at 130.326 kb on - strand, within Dsui_0130 at 130.326 kb on - strand, within Dsui_0130 at 130.342 kb on - strand, within Dsui_0130 at 130.363 kb on - strand, within Dsui_0130 at 130.380 kb on - strand, within Dsui_0130 at 130.438 kb on + strand at 130.460 kb on - strand, within Dsui_0130 at 130.461 kb on - strand, within Dsui_0130 at 130.631 kb on - strand at 130.660 kb on - strand at 130.660 kb on - strand at 130.677 kb on - strand at 130.699 kb on + strand at 130.714 kb on + strand at 130.722 kb on - strand at 130.732 kb on - strand at 130.741 kb on + strand at 130.781 kb on + strand at 130.791 kb on + strand at 130.799 kb on - strand at 130.799 kb on - strand at 130.815 kb on + strand at 130.823 kb on - strand at 130.823 kb on - strand at 130.823 kb on - strand at 130.823 kb on - strand at 130.829 kb on - strand at 130.834 kb on + strand at 130.842 kb on - strand at 130.878 kb on + strand at 130.879 kb on + strand at 130.886 kb on - strand at 130.887 kb on - strand at 130.955 kb on + strand at 131.012 kb on - strand at 131.037 kb on - strand at 131.054 kb on + strand at 131.057 kb on - strand at 131.062 kb on - strand at 131.089 kb on + strand at 131.093 kb on + strand at 131.099 kb on + strand at 131.099 kb on + strand at 131.122 kb on + strand at 131.172 kb on - strand at 131.175 kb on + strand at 131.175 kb on + strand at 131.175 kb on + strand at 131.175 kb on + strand at 131.183 kb on - strand at 131.183 kb on - strand at 131.183 kb on - strand at 131.199 kb on - strand at 131.201 kb on + strand at 131.201 kb on + strand at 131.211 kb on + strand at 131.211 kb on + strand at 131.229 kb on + strand at 131.236 kb on + strand at 131.247 kb on + strand at 131.273 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.291 kb on + strand at 131.309 kb on + strand at 131.309 kb on + strand at 131.339 kb on - strand at 131.364 kb on + strand at 131.372 kb on - strand, within Dsui_0131 at 131.396 kb on - strand at 131.408 kb on + strand, within Dsui_0131 at 131.408 kb on + strand, within Dsui_0131 at 131.416 kb on - strand, within Dsui_0131 at 131.417 kb on + strand, within Dsui_0131 at 131.422 kb on + strand, within Dsui_0131 at 131.434 kb on + strand, within Dsui_0131 at 131.456 kb on + strand, within Dsui_0131 at 131.482 kb on - strand, within Dsui_0131 at 131.493 kb on - strand at 131.506 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.543 kb on - strand, within Dsui_0131 at 131.543 kb on - strand, within Dsui_0131 at 131.576 kb on - strand, within Dsui_0131 at 131.663 kb on + strand, within Dsui_0131 at 131.676 kb on + strand, within Dsui_0131 at 131.703 kb on - strand, within Dsui_0131 at 131.705 kb on + strand, within Dsui_0131 at 131.733 kb on + strand, within Dsui_0131 at 131.794 kb on + strand, within Dsui_0131 at 131.816 kb on - strand, within Dsui_0131 at 131.855 kb on - strand, within Dsui_0131 at 131.880 kb on + strand, within Dsui_0131 at 131.882 kb on + strand, within Dsui_0131 at 131.882 kb on + strand, within Dsui_0131 at 131.888 kb on - strand, within Dsui_0131 at 131.907 kb on - strand, within Dsui_0131 at 131.993 kb on + strand, within Dsui_0131 at 132.067 kb on - strand, within Dsui_0131 at 132.069 kb on + strand, within Dsui_0131 at 132.132 kb on + strand, within Dsui_0131 at 132.140 kb on - strand, within Dsui_0131 at 132.247 kb on + strand, within Dsui_0131 at 132.247 kb on + strand, within Dsui_0131 at 132.255 kb on - strand, within Dsui_0131 at 132.275 kb on + strand, within Dsui_0131 at 132.278 kb on - strand, within Dsui_0131 at 132.283 kb on - strand, within Dsui_0131 at 132.335 kb on - strand, within Dsui_0131 at 132.353 kb on - strand, within Dsui_0131 at 132.485 kb on + strand, within Dsui_0131 at 132.526 kb on + strand, within Dsui_0131 at 132.532 kb on - strand, within Dsui_0131 at 132.539 kb on + strand, within Dsui_0131 at 132.839 kb on - strand, within Dsui_0131 at 133.024 kb on - strand at 133.026 kb on + strand at 133.026 kb on + strand at 133.034 kb on - strand at 133.107 kb on + strand at 133.114 kb on + strand at 133.122 kb on - strand at 133.122 kb on - strand at 133.200 kb on - strand at 133.257 kb on - strand at 133.339 kb on + strand, within Dsui_0132 at 133.339 kb on + strand, within Dsui_0132 at 133.344 kb on + strand, within Dsui_0132 at 133.352 kb on - strand, within Dsui_0132 at 133.353 kb on - strand, within Dsui_0132 at 133.467 kb on - strand, within Dsui_0132 at 133.472 kb on - strand, within Dsui_0132 at 133.554 kb on - strand at 133.622 kb on + strand, within Dsui_0132 at 133.622 kb on + strand, within Dsui_0132 at 133.649 kb on + strand, within Dsui_0132 at 133.650 kb on + strand, within Dsui_0132 at 133.684 kb on + strand, within Dsui_0132 at 133.685 kb on + strand, within Dsui_0132 at 133.822 kb on - strand, within Dsui_0132 at 133.835 kb on - strand, within Dsui_0132 at 133.840 kb on - strand, within Dsui_0132 at 133.885 kb on + strand at 133.895 kb on - strand, within Dsui_0132 at 133.895 kb on - strand, within Dsui_0132 at 133.961 kb on - strand, within Dsui_0132 at 133.998 kb on - strand, within Dsui_0132
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 130,308 - Dsui_0130 0.81 +0.6 130,311 + Dsui_0130 0.81 -0.0 130,318 + Dsui_0130 0.81 +2.0 130,326 - Dsui_0130 0.82 +0.1 130,326 - Dsui_0130 0.82 +0.3 130,342 - Dsui_0130 0.83 +0.0 130,363 - Dsui_0130 0.83 +0.3 130,380 - Dsui_0130 0.84 +0.3 130,438 + +1.0 130,460 - Dsui_0130 0.88 +0.5 130,461 - Dsui_0130 0.88 -0.1 130,631 - +0.0 130,660 - -0.2 130,660 - -0.8 130,677 - -0.1 130,699 + -2.4 130,714 + +1.0 130,722 - +0.1 130,732 - +0.4 130,741 + +1.0 130,781 + -0.6 130,791 + +1.0 130,799 - +1.0 130,799 - -0.6 130,815 + +1.0 130,823 - -0.0 130,823 - -1.0 130,823 - -0.0 130,823 - -0.6 130,829 - +1.0 130,834 + -0.1 130,842 - -0.0 130,878 + -0.1 130,879 + +0.0 130,886 - -0.6 130,887 - -1.6 130,955 + +0.2 131,012 - +1.0 131,037 - -2.0 131,054 + +0.1 131,057 - +1.0 131,062 - +1.0 131,089 + +0.2 131,093 + +0.4 131,099 + +0.3 131,099 + -0.0 131,122 + +0.3 131,172 - +1.0 131,175 + +0.0 131,175 + +0.1 131,175 + -0.4 131,175 + +0.1 131,183 - -0.6 131,183 - +1.0 131,183 - -0.6 131,199 - +1.0 131,201 + -0.1 131,201 + -0.0 131,211 + +0.3 131,211 + -0.3 131,229 + +0.0 131,236 + +0.1 131,247 + +0.9 131,273 + -0.0 131,277 + -0.1 131,277 + -0.1 131,277 + +0.1 131,277 + +0.1 131,277 + -0.0 131,277 + -0.1 131,285 - +1.0 131,285 - +1.0 131,285 - -1.8 131,285 - -1.0 131,285 - +1.0 131,285 - +1.0 131,285 - +1.0 131,291 + +0.2 131,309 + +0.1 131,309 + +0.3 131,339 - +1.0 131,364 + -0.1 131,372 - Dsui_0131 0.10 +1.0 131,396 - +1.0 131,408 + Dsui_0131 0.12 -0.0 131,408 + Dsui_0131 0.12 +0.2 131,416 - Dsui_0131 0.12 +1.0 131,417 + Dsui_0131 0.12 -0.3 131,422 + Dsui_0131 0.13 +0.2 131,434 + Dsui_0131 0.13 +0.2 131,456 + Dsui_0131 0.15 +0.1 131,482 - Dsui_0131 0.16 -0.0 131,493 - +1.0 131,506 + Dsui_0131 0.17 -0.1 131,535 + Dsui_0131 0.19 -0.2 131,535 + Dsui_0131 0.19 +0.1 131,535 + Dsui_0131 0.19 -0.1 131,535 + Dsui_0131 0.19 -0.0 131,543 - Dsui_0131 0.19 -0.0 131,543 - Dsui_0131 0.19 +1.0 131,576 - Dsui_0131 0.21 -0.6 131,663 + Dsui_0131 0.26 +0.2 131,676 + Dsui_0131 0.26 +0.2 131,703 - Dsui_0131 0.28 +1.0 131,705 + Dsui_0131 0.28 -0.1 131,733 + Dsui_0131 0.29 -0.3 131,794 + Dsui_0131 0.33 +0.4 131,816 - Dsui_0131 0.34 +1.0 131,855 - Dsui_0131 0.36 -0.6 131,880 + Dsui_0131 0.37 -0.1 131,882 + Dsui_0131 0.37 +0.2 131,882 + Dsui_0131 0.37 -0.1 131,888 - Dsui_0131 0.38 -0.0 131,907 - Dsui_0131 0.39 +1.0 131,993 + Dsui_0131 0.43 -0.1 132,067 - Dsui_0131 0.47 -0.6 132,069 + Dsui_0131 0.48 -0.1 132,132 + Dsui_0131 0.51 -0.1 132,140 - Dsui_0131 0.51 +1.0 132,247 + Dsui_0131 0.57 +0.4 132,247 + Dsui_0131 0.57 -0.3 132,255 - Dsui_0131 0.58 +1.0 132,275 + Dsui_0131 0.59 +0.1 132,278 - Dsui_0131 0.59 +1.0 132,283 - Dsui_0131 0.59 +1.0 132,335 - Dsui_0131 0.62 +1.0 132,353 - Dsui_0131 0.63 +1.0 132,485 + Dsui_0131 0.70 -0.4 132,526 + Dsui_0131 0.72 -0.2 132,532 - Dsui_0131 0.72 -0.0 132,539 + Dsui_0131 0.73 -0.3 132,839 - Dsui_0131 0.89 +1.0 133,024 - -0.6 133,026 + -0.0 133,026 + -0.0 133,034 - +1.0 133,107 + +1.0 133,114 + -0.1 133,122 - +1.0 133,122 - +0.4 133,200 - +1.0 133,257 - -1.4 133,339 + Dsui_0132 0.17 +0.0 133,339 + Dsui_0132 0.17 -0.4 133,344 + Dsui_0132 0.17 -1.0 133,352 - Dsui_0132 0.18 +1.0 133,353 - Dsui_0132 0.18 -0.0 133,467 - Dsui_0132 0.28 -1.6 133,472 - Dsui_0132 0.28 -1.8 133,554 - +1.0 133,622 + Dsui_0132 0.41 +0.6 133,622 + Dsui_0132 0.41 +0.6 133,649 + Dsui_0132 0.43 -1.4 133,650 + Dsui_0132 0.44 +0.5 133,684 + Dsui_0132 0.46 -1.4 133,685 + Dsui_0132 0.47 -0.5 133,822 - Dsui_0132 0.58 -1.0 133,835 - Dsui_0132 0.59 -0.6 133,840 - Dsui_0132 0.60 +0.4 133,885 + +1.0 133,895 - Dsui_0132 0.65 +1.0 133,895 - Dsui_0132 0.65 -0.0 133,961 - Dsui_0132 0.70 +2.0 133,998 - Dsui_0132 0.74 -0.6
Or see this region's nucleotide sequence