Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0126 and Dsui_0127 are separated by 160 nucleotides Dsui_0127 and Dsui_0128 are separated by 81 nucleotides
Dsui_0126: Dsui_0126 - (4Fe-4S) cluster-containing protein, at 123,453 to 124,892
_0126
Dsui_0127: Dsui_0127 - transcriptional regulator, at 125,053 to 125,886
_0127
Dsui_0128: Dsui_0128 - D-alanyl-D-alanine carboxypeptidase, at 125,968 to 126,987
_0128
Position (kb)
125
126 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 124.092 kb on + strand, within Dsui_0126 at 124.111 kb on + strand at 124.127 kb on + strand, within Dsui_0126 at 124.220 kb on - strand, within Dsui_0126 at 124.276 kb on + strand, within Dsui_0126 at 124.286 kb on - strand at 124.322 kb on - strand, within Dsui_0126 at 124.332 kb on + strand at 124.348 kb on - strand, within Dsui_0126 at 124.396 kb on - strand, within Dsui_0126 at 124.396 kb on - strand, within Dsui_0126 at 124.533 kb on - strand, within Dsui_0126 at 124.543 kb on - strand, within Dsui_0126 at 124.567 kb on - strand, within Dsui_0126 at 124.740 kb on - strand, within Dsui_0126 at 124.759 kb on - strand at 124.781 kb on + strand at 124.785 kb on - strand at 124.828 kb on - strand at 124.848 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.910 kb on + strand at 125.014 kb on - strand at 125.072 kb on + strand at 125.080 kb on - strand at 125.135 kb on + strand at 125.204 kb on + strand, within Dsui_0127 at 125.204 kb on + strand, within Dsui_0127 at 125.204 kb on + strand, within Dsui_0127 at 125.212 kb on - strand, within Dsui_0127 at 125.217 kb on + strand, within Dsui_0127 at 125.217 kb on + strand, within Dsui_0127 at 125.240 kb on - strand, within Dsui_0127 at 125.266 kb on + strand, within Dsui_0127 at 125.309 kb on + strand, within Dsui_0127 at 125.383 kb on - strand, within Dsui_0127 at 125.388 kb on - strand, within Dsui_0127 at 125.399 kb on - strand, within Dsui_0127 at 125.411 kb on + strand, within Dsui_0127 at 125.429 kb on + strand, within Dsui_0127 at 125.482 kb on - strand, within Dsui_0127 at 125.514 kb on + strand, within Dsui_0127 at 125.536 kb on - strand, within Dsui_0127 at 125.541 kb on - strand, within Dsui_0127 at 125.556 kb on + strand, within Dsui_0127 at 125.556 kb on + strand, within Dsui_0127 at 125.564 kb on - strand, within Dsui_0127 at 125.816 kb on + strand at 125.837 kb on + strand at 125.857 kb on + strand at 125.857 kb on + strand at 125.858 kb on - strand at 125.862 kb on + strand at 125.875 kb on - strand at 126.085 kb on - strand, within Dsui_0128 at 126.143 kb on + strand at 126.151 kb on - strand, within Dsui_0128 at 126.151 kb on - strand, within Dsui_0128 at 126.151 kb on - strand, within Dsui_0128 at 126.173 kb on + strand, within Dsui_0128 at 126.221 kb on + strand, within Dsui_0128 at 126.233 kb on + strand, within Dsui_0128 at 126.271 kb on + strand at 126.279 kb on - strand, within Dsui_0128 at 126.284 kb on + strand, within Dsui_0128 at 126.298 kb on - strand, within Dsui_0128 at 126.406 kb on + strand, within Dsui_0128 at 126.438 kb on + strand, within Dsui_0128 at 126.439 kb on + strand, within Dsui_0128 at 126.466 kb on + strand, within Dsui_0128 at 126.534 kb on + strand, within Dsui_0128 at 126.534 kb on + strand, within Dsui_0128 at 126.541 kb on - strand, within Dsui_0128 at 126.603 kb on + strand at 126.603 kb on + strand at 126.656 kb on - strand, within Dsui_0128 at 126.680 kb on + strand, within Dsui_0128 at 126.688 kb on - strand, within Dsui_0128 at 126.688 kb on - strand, within Dsui_0128 at 126.704 kb on - strand, within Dsui_0128 at 126.715 kb on - strand, within Dsui_0128 at 126.720 kb on - strand, within Dsui_0128 at 126.727 kb on + strand, within Dsui_0128 at 126.774 kb on + strand, within Dsui_0128 at 126.782 kb on - strand, within Dsui_0128 at 126.782 kb on - strand, within Dsui_0128 at 126.842 kb on + strand, within Dsui_0128 at 126.850 kb on - strand, within Dsui_0128
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 124,092 + Dsui_0126 0.44 -1.4 124,111 + +1.0 124,127 + Dsui_0126 0.47 -0.0 124,220 - Dsui_0126 0.53 -0.8 124,276 + Dsui_0126 0.57 -0.6 124,286 - -0.0 124,322 - Dsui_0126 0.60 -0.2 124,332 + +1.0 124,348 - Dsui_0126 0.62 +0.8 124,396 - Dsui_0126 0.65 -0.0 124,396 - Dsui_0126 0.65 +0.4 124,533 - Dsui_0126 0.75 -0.4 124,543 - Dsui_0126 0.76 -0.3 124,567 - Dsui_0126 0.77 +0.1 124,740 - Dsui_0126 0.89 -0.2 124,759 - +0.1 124,781 + +1.0 124,785 - +1.8 124,828 - +0.3 124,848 + +1.0 124,900 + +1.0 124,900 + -0.0 124,900 + -1.0 124,900 + +1.0 124,900 + +1.0 124,900 + -0.6 124,900 + -0.0 124,908 - -0.5 124,908 - +0.7 124,908 - -0.4 124,908 - -0.3 124,908 - -1.4 124,908 - -1.1 124,908 - -0.6 124,908 - +1.0 124,908 - -0.1 124,910 + -0.0 125,014 - +1.0 125,072 + -0.3 125,080 - -0.0 125,135 + -0.4 125,204 + Dsui_0127 0.18 -0.6 125,204 + Dsui_0127 0.18 -0.3 125,204 + Dsui_0127 0.18 -0.4 125,212 - Dsui_0127 0.19 -0.6 125,217 + Dsui_0127 0.20 -0.2 125,217 + Dsui_0127 0.20 -0.9 125,240 - Dsui_0127 0.22 -0.6 125,266 + Dsui_0127 0.26 -0.8 125,309 + Dsui_0127 0.31 -0.7 125,383 - Dsui_0127 0.40 -1.8 125,388 - Dsui_0127 0.40 -0.6 125,399 - Dsui_0127 0.41 -0.0 125,411 + Dsui_0127 0.43 -0.5 125,429 + Dsui_0127 0.45 -1.6 125,482 - Dsui_0127 0.51 -0.0 125,514 + Dsui_0127 0.55 -0.6 125,536 - Dsui_0127 0.58 +1.0 125,541 - Dsui_0127 0.59 -0.0 125,556 + Dsui_0127 0.60 -0.3 125,556 + Dsui_0127 0.60 -0.7 125,564 - Dsui_0127 0.61 -0.6 125,816 + -0.5 125,837 + -0.5 125,857 + -0.4 125,857 + -0.3 125,858 - -3.1 125,862 + +0.3 125,875 - -1.8 126,085 - Dsui_0128 0.11 -1.2 126,143 + -0.0 126,151 - Dsui_0128 0.18 -1.6 126,151 - Dsui_0128 0.18 -1.4 126,151 - Dsui_0128 0.18 -1.2 126,173 + Dsui_0128 0.20 +1.0 126,221 + Dsui_0128 0.25 -1.0 126,233 + Dsui_0128 0.26 -1.4 126,271 + +1.0 126,279 - Dsui_0128 0.30 -0.8 126,284 + Dsui_0128 0.31 -0.0 126,298 - Dsui_0128 0.32 -1.2 126,406 + Dsui_0128 0.43 -1.4 126,438 + Dsui_0128 0.46 +0.4 126,439 + Dsui_0128 0.46 -0.0 126,466 + Dsui_0128 0.49 -0.0 126,534 + Dsui_0128 0.55 +1.0 126,534 + Dsui_0128 0.55 -2.0 126,541 - Dsui_0128 0.56 -1.0 126,603 + +1.0 126,603 + +1.0 126,656 - Dsui_0128 0.67 -1.2 126,680 + Dsui_0128 0.70 +1.0 126,688 - Dsui_0128 0.71 -1.3 126,688 - Dsui_0128 0.71 -1.2 126,704 - Dsui_0128 0.72 -0.9 126,715 - Dsui_0128 0.73 -0.9 126,720 - Dsui_0128 0.74 -1.2 126,727 + Dsui_0128 0.74 +1.0 126,774 + Dsui_0128 0.79 -0.0 126,782 - Dsui_0128 0.80 -0.9 126,782 - Dsui_0128 0.80 -1.1 126,842 + Dsui_0128 0.86 -0.6 126,850 - Dsui_0128 0.86 -1.3
Or see this region's nucleotide sequence