Experiment: ALP with Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0057 and Dsui_0058 are separated by 7 nucleotides Dsui_0058 and Dsui_0059 overlap by 62 nucleotides Dsui_0059 and Dsui_0060 are separated by 3 nucleotides Dsui_0060 and Dsui_0061 overlap by 4 nucleotides
Dsui_0057: Dsui_0057 - glycosyltransferase, at 54,298 to 55,488
_0057
Dsui_0058: Dsui_0058 - Glycosyl transferase family 11, at 55,496 to 56,431
_0058
Dsui_0059: Dsui_0059 - glycosyl transferase, at 56,370 to 57,104
_0059
Dsui_0060: Dsui_0060 - GDP-D-mannose dehydratase, at 57,108 to 58,082
_0060
Dsui_0061: Dsui_0061 - glycosyltransferase, at 58,079 to 59,182
_0061
Position (kb) 56
57
58 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 55.384 kb on - strand at 55.394 kb on - strand at 55.397 kb on + strand at 55.405 kb on - strand at 55.438 kb on - strand at 55.455 kb on - strand at 55.455 kb on - strand at 55.461 kb on + strand at 55.483 kb on + strand at 55.702 kb on + strand, within Dsui_0058 at 55.727 kb on + strand, within Dsui_0058 at 55.784 kb on + strand, within Dsui_0058 at 55.792 kb on - strand, within Dsui_0058 at 55.833 kb on + strand, within Dsui_0058 at 55.856 kb on + strand, within Dsui_0058 at 55.897 kb on - strand, within Dsui_0058 at 55.935 kb on + strand, within Dsui_0058 at 55.947 kb on - strand, within Dsui_0058 at 55.964 kb on - strand, within Dsui_0058 at 56.149 kb on - strand, within Dsui_0058 at 56.159 kb on + strand, within Dsui_0058 at 56.193 kb on - strand, within Dsui_0058 at 56.250 kb on - strand, within Dsui_0058 at 56.367 kb on + strand at 56.386 kb on - strand at 56.391 kb on + strand at 56.426 kb on - strand at 56.464 kb on + strand, within Dsui_0059 at 56.677 kb on - strand, within Dsui_0059 at 56.787 kb on - strand, within Dsui_0059 at 56.860 kb on + strand, within Dsui_0059 at 56.860 kb on + strand, within Dsui_0059 at 56.860 kb on + strand, within Dsui_0059 at 56.865 kb on + strand, within Dsui_0059 at 56.865 kb on + strand, within Dsui_0059 at 56.868 kb on - strand, within Dsui_0059 at 56.868 kb on - strand, within Dsui_0059 at 56.871 kb on + strand, within Dsui_0059 at 56.873 kb on - strand, within Dsui_0059 at 56.957 kb on + strand, within Dsui_0059 at 57.007 kb on - strand, within Dsui_0059 at 57.021 kb on + strand, within Dsui_0059 at 57.041 kb on - strand at 57.106 kb on + strand at 57.119 kb on - strand at 57.132 kb on - strand at 57.137 kb on - strand at 57.139 kb on + strand at 57.147 kb on - strand at 57.147 kb on - strand at 57.183 kb on - strand at 57.275 kb on - strand, within Dsui_0060 at 57.283 kb on - strand, within Dsui_0060 at 57.297 kb on - strand, within Dsui_0060 at 57.331 kb on + strand, within Dsui_0060 at 57.420 kb on + strand, within Dsui_0060 at 57.486 kb on + strand, within Dsui_0060 at 57.539 kb on - strand, within Dsui_0060 at 57.584 kb on + strand, within Dsui_0060 at 57.590 kb on - strand, within Dsui_0060 at 57.592 kb on - strand, within Dsui_0060 at 57.681 kb on + strand, within Dsui_0060 at 57.762 kb on - strand, within Dsui_0060 at 57.764 kb on + strand, within Dsui_0060 at 57.764 kb on + strand, within Dsui_0060 at 57.772 kb on - strand, within Dsui_0060 at 57.816 kb on + strand, within Dsui_0060 at 57.829 kb on - strand, within Dsui_0060 at 57.831 kb on + strand, within Dsui_0060 at 57.831 kb on + strand, within Dsui_0060 at 57.838 kb on - strand, within Dsui_0060 at 57.863 kb on + strand, within Dsui_0060 at 57.863 kb on + strand, within Dsui_0060 at 57.882 kb on + strand, within Dsui_0060 at 57.888 kb on - strand, within Dsui_0060 at 57.903 kb on + strand, within Dsui_0060 at 57.994 kb on + strand at 57.994 kb on + strand at 58.003 kb on + strand at 58.023 kb on - strand at 58.046 kb on - strand at 58.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.004 mg/ml remove 55,384 - -2.1 55,394 - -3.7 55,397 + -0.0 55,405 - -3.6 55,438 - -3.9 55,455 - -4.3 55,455 - -3.7 55,461 + -0.0 55,483 + -1.0 55,702 + Dsui_0058 0.22 +1.0 55,727 + Dsui_0058 0.25 -4.7 55,784 + Dsui_0058 0.31 -0.0 55,792 - Dsui_0058 0.32 -3.6 55,833 + Dsui_0058 0.36 +1.0 55,856 + Dsui_0058 0.38 -0.6 55,897 - Dsui_0058 0.43 -4.1 55,935 + Dsui_0058 0.47 +1.0 55,947 - Dsui_0058 0.48 -3.6 55,964 - Dsui_0058 0.50 -3.0 56,149 - Dsui_0058 0.70 -3.1 56,159 + Dsui_0058 0.71 -0.6 56,193 - Dsui_0058 0.74 -3.3 56,250 - Dsui_0058 0.81 -4.1 56,367 + -0.0 56,386 - +0.2 56,391 + +1.0 56,426 - -3.1 56,464 + Dsui_0059 0.13 +1.0 56,677 - Dsui_0059 0.42 -5.6 56,787 - Dsui_0059 0.57 -2.2 56,860 + Dsui_0059 0.67 -0.0 56,860 + Dsui_0059 0.67 -0.0 56,860 + Dsui_0059 0.67 +1.0 56,865 + Dsui_0059 0.67 -0.6 56,865 + Dsui_0059 0.67 +1.0 56,868 - Dsui_0059 0.68 -5.2 56,868 - Dsui_0059 0.68 -4.9 56,871 + Dsui_0059 0.68 +1.0 56,873 - Dsui_0059 0.68 -5.7 56,957 + Dsui_0059 0.80 -1.6 57,007 - Dsui_0059 0.87 -3.2 57,021 + Dsui_0059 0.89 -0.0 57,041 - -3.9 57,106 + -0.0 57,119 - -0.3 57,132 - -0.1 57,137 - -0.1 57,139 + -1.4 57,147 - +0.2 57,147 - +0.4 57,183 - -2.3 57,275 - Dsui_0060 0.17 -1.7 57,283 - Dsui_0060 0.18 -1.9 57,297 - Dsui_0060 0.19 -1.9 57,331 + Dsui_0060 0.23 +1.0 57,420 + Dsui_0060 0.32 -0.0 57,486 + Dsui_0060 0.39 -0.0 57,539 - Dsui_0060 0.44 -2.3 57,584 + Dsui_0060 0.49 -0.0 57,590 - Dsui_0060 0.49 -2.2 57,592 - Dsui_0060 0.50 -1.5 57,681 + Dsui_0060 0.59 +1.0 57,762 - Dsui_0060 0.67 -1.6 57,764 + Dsui_0060 0.67 +1.0 57,764 + Dsui_0060 0.67 -1.0 57,772 - Dsui_0060 0.68 -0.0 57,816 + Dsui_0060 0.73 -0.6 57,829 - Dsui_0060 0.74 -2.0 57,831 + Dsui_0060 0.74 -0.0 57,831 + Dsui_0060 0.74 -0.0 57,838 - Dsui_0060 0.75 -2.0 57,863 + Dsui_0060 0.77 +1.0 57,863 + Dsui_0060 0.77 +1.0 57,882 + Dsui_0060 0.79 +1.0 57,888 - Dsui_0060 0.80 -2.5 57,903 + Dsui_0060 0.82 +1.0 57,994 + +1.0 57,994 + +1.0 58,003 + -0.0 58,023 - -2.0 58,046 - -1.7 58,087 + -0.0
Or see this region's nucleotide sequence