Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27955 and BWI76_RS27960 are separated by 114 nucleotides BWI76_RS27960 and BWI76_RS27965 are separated by 109 nucleotides
BWI76_RS27955: BWI76_RS27955 - sugar-phosphatase, at 5,797,108 to 5,797,920
_RS27955
BWI76_RS27960: BWI76_RS27960 - alcohol dehydrogenase protein, at 5,798,035 to 5,799,060
_RS27960
BWI76_RS27965: BWI76_RS27965 - LysR family transcriptional regulator, at 5,799,170 to 5,800,105
_RS27965
Position (kb) 5798
5799
5800 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5797.154 kb on + strand at 5797.207 kb on + strand, within BWI76_RS27955 at 5797.460 kb on + strand, within BWI76_RS27955 at 5797.460 kb on + strand, within BWI76_RS27955 at 5797.468 kb on - strand, within BWI76_RS27955 at 5797.544 kb on - strand, within BWI76_RS27955 at 5797.603 kb on - strand, within BWI76_RS27955 at 5797.662 kb on - strand, within BWI76_RS27955 at 5797.701 kb on + strand, within BWI76_RS27955 at 5797.795 kb on + strand, within BWI76_RS27955 at 5797.942 kb on + strand at 5798.090 kb on - strand at 5798.318 kb on - strand, within BWI76_RS27960 at 5798.396 kb on - strand, within BWI76_RS27960 at 5798.396 kb on - strand, within BWI76_RS27960 at 5798.410 kb on - strand, within BWI76_RS27960 at 5798.579 kb on + strand, within BWI76_RS27960 at 5798.612 kb on + strand, within BWI76_RS27960 at 5798.617 kb on + strand, within BWI76_RS27960 at 5798.624 kb on + strand, within BWI76_RS27960 at 5798.632 kb on - strand, within BWI76_RS27960 at 5798.927 kb on + strand, within BWI76_RS27960 at 5798.960 kb on - strand at 5799.048 kb on - strand at 5799.174 kb on + strand at 5799.336 kb on + strand, within BWI76_RS27965 at 5799.344 kb on - strand, within BWI76_RS27965 at 5799.592 kb on - strand, within BWI76_RS27965 at 5799.592 kb on - strand, within BWI76_RS27965 at 5799.614 kb on + strand, within BWI76_RS27965 at 5799.660 kb on + strand, within BWI76_RS27965 at 5799.668 kb on - strand, within BWI76_RS27965 at 5799.694 kb on + strand, within BWI76_RS27965 at 5799.707 kb on + strand, within BWI76_RS27965 at 5799.810 kb on + strand, within BWI76_RS27965 at 5799.810 kb on + strand, within BWI76_RS27965 at 5799.818 kb on - strand, within BWI76_RS27965 at 5799.995 kb on - strand, within BWI76_RS27965
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 5,797,154 + -0.1 5,797,207 + BWI76_RS27955 0.12 -0.4 5,797,460 + BWI76_RS27955 0.43 -0.8 5,797,460 + BWI76_RS27955 0.43 +0.1 5,797,468 - BWI76_RS27955 0.44 +0.4 5,797,544 - BWI76_RS27955 0.54 +0.3 5,797,603 - BWI76_RS27955 0.61 -0.6 5,797,662 - BWI76_RS27955 0.68 +0.4 5,797,701 + BWI76_RS27955 0.73 +0.3 5,797,795 + BWI76_RS27955 0.85 -1.0 5,797,942 + -2.3 5,798,090 - +0.6 5,798,318 - BWI76_RS27960 0.28 -0.2 5,798,396 - BWI76_RS27960 0.35 -0.1 5,798,396 - BWI76_RS27960 0.35 -0.2 5,798,410 - BWI76_RS27960 0.37 +0.2 5,798,579 + BWI76_RS27960 0.53 -0.7 5,798,612 + BWI76_RS27960 0.56 +0.4 5,798,617 + BWI76_RS27960 0.57 +1.6 5,798,624 + BWI76_RS27960 0.57 -0.5 5,798,632 - BWI76_RS27960 0.58 +0.1 5,798,927 + BWI76_RS27960 0.87 -0.1 5,798,960 - -0.3 5,799,048 - -0.1 5,799,174 + +0.4 5,799,336 + BWI76_RS27965 0.18 +0.2 5,799,344 - BWI76_RS27965 0.19 +0.2 5,799,592 - BWI76_RS27965 0.45 -0.2 5,799,592 - BWI76_RS27965 0.45 +3.2 5,799,614 + BWI76_RS27965 0.47 +0.7 5,799,660 + BWI76_RS27965 0.52 -0.1 5,799,668 - BWI76_RS27965 0.53 -0.9 5,799,694 + BWI76_RS27965 0.56 -0.7 5,799,707 + BWI76_RS27965 0.57 +0.2 5,799,810 + BWI76_RS27965 0.68 -0.7 5,799,810 + BWI76_RS27965 0.68 +0.6 5,799,818 - BWI76_RS27965 0.69 +0.1 5,799,995 - BWI76_RS27965 0.88 +1.3
Or see this region's nucleotide sequence